Transcript Information: S_Transcript_79918.p1


Annotated TAIR IDAT5G14590.1
Annotated Gene NameIsocitrate/isopropylmalate dehydrogenase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4703533-4706627 | Reverse length=485
E-Value1.8E-66
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4364015215306
Replicate 23.8842939361822
Replicate 32.3378116162311
Condition 2: 8 Hour
Replicate 14.505364151507
Replicate 24.7264468957169
Replicate 34.2031248798555
Condition 3: 24 Hour
Replicate 17.0765115532911
Replicate 24.4689205925192
Replicate 34.7957408375925


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79918.p1 GENE.S_Transcript_79918~~S_Transcript_79918.p1 ORF type:5prime_partial len:142 (+),score=19.61,Iso_dh|PF00180.16|3.9e-16 S_Transcript_79918:3-428(+)
GGATGCTTAACCACTACCCTAAGGGCTATGGTTAGAATTTTCATTGTTAATAACCACAAAGTTTTTCAGTTATCTTCTGACGGGAAAACATTAGAAGCTGAGGCAGCTCACGGGACAGTAACTAGGCATTTTCGGTTGCATCAAAAAGGGCAAGAAACAAGCACAAACAGTATTGCATCTATATTTGCATGGACGCGTGGATTAGAACATAGGGCGAAACTTGATGGGAATCAGCAGTTGCTTGACTTTATTAAGAAATTGGAAAGCGCCTGTGTTGAGACAGTGGAATCAGGGAAAATGACGAAAGATCTGGCTATACTGCTCCATGGGCCAAAGGTTACGAGGGAGCTGTACGTTAATACTGAGGAATTTATTGATGCTGTTGCTCAAAATCTCAAATCAAAAATTGAAGCGCCATCACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79918.p1 GENE.S_Transcript_79918~~S_Transcript_79918.p1 ORF type:5prime_partial len:142 (+),score=19.61,Iso_dh|PF00180.16|3.9e-16 S_Transcript_79918:3-428(+)
GCLTTTLRAMVRIFIVNNHKVFQLSSDGKTLEAEAAHGTVTRHFRLHQKGQETSTNSIASIFAWTRGLEHRAKLDGNQQLLDFIKKLESACVETVESGKMTKDLAILLHGPKVTRELYVNTEEFIDAVAQNLKSKIEAPSH*

Click here to download the sequence:
Link to NCBI Protein BLAST