Transcript Information: S_Transcript_79962.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5489048337936
Replicate 22.3346867256629
Replicate 31.4637092129842
Condition 2: 8 Hour
Replicate 14.174811861026
Replicate 23.0776088075814
Replicate 32.1428629867442
Condition 3: 24 Hour
Replicate 11.7337209119519
Replicate 21.199143469648
Replicate 32.4020994671539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_79962.p1 GENE.S_Transcript_79962~~S_Transcript_79962.p1 ORF type:complete len:189 (+),score=29.85,zf-RVT|PF13966.2|1.3e-16,zf-RVT|PF13966.2|3.3e+03 S_Transcript_79962:3544-4110(+)
ATGGTGAGAAAGGTTATCCAGGCTAGAGATGTAAAGGAGTATATAAGAGACTGGGAGGCAGTGATGGCTCAAGGGAAGTTCTCCATCAGGAAAACTTATCTAAAGTTAATAGGGGACTTACCCAAGGTCACTTGGAGGAAAGCAGTCATATCTAATCGAGCTAGGCCTAGAGCAGTGATGACTCTATGGATGGCGTTATGGAAGAGACTTCTTACTACAAACAGGCTAAAAGAGTGGGGCATGATAGTTGAAAAGCAGTGTGTTCTCTGTAAAGGCTCTAATGAAACCTTAGAACATTTGCTGTATGATTGTGATTTTACTCGGCAAATTTGGAAGCAGGTATTTGGTTGGCAGGGGATTCATTTGTCAAACAACATCCAAGACATTATCACCAAGATGGCCAAGAAGAGAACTAAACAGGCACACATGTTCCTAATGGCTGCTGCTGAGACAATTCATGCAGTGTGGCTCGAAAGGAACAACTGGATATTTGAAGGTATGGAGCAGAATATGGAGAAGATATATAGGGATATACAACTGCATGTTTATTGTAGACAGGGTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_79962.p1 GENE.S_Transcript_79962~~S_Transcript_79962.p1 ORF type:complete len:189 (+),score=29.85,zf-RVT|PF13966.2|1.3e-16,zf-RVT|PF13966.2|3.3e+03 S_Transcript_79962:3544-4110(+)
MVRKVIQARDVKEYIRDWEAVMAQGKFSIRKTYLKLIGDLPKVTWRKAVISNRARPRAVMTLWMALWKRLLTTNRLKEWGMIVEKQCVLCKGSNETLEHLLYDCDFTRQIWKQVFGWQGIHLSNNIQDIITKMAKKRTKQAHMFLMAAAETIHAVWLERNNWIFEGMEQNMEKIYRDIQLHVYCRQGD*

Click here to download the sequence:
Link to NCBI Protein BLAST