Transcript Information: S_Transcript_80000.p1


Annotated TAIR IDAT4G02210.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24960.2); Has 791 Blast hits to 465 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 17; Plants - 748; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:974320-975917 | Reverse length=439
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4709842075103
Replicate 23.2652928545122
Replicate 35.2377370477426
Condition 2: 8 Hour
Replicate 14.009173379621
Replicate 24.2953949388275
Replicate 34.9452766443557
Condition 3: 24 Hour
Replicate 14.631115300006
Replicate 23.8981755911317
Replicate 33.7328625719572


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80000.p1 GENE.S_Transcript_80000~~S_Transcript_80000.p1 ORF type:3prime_partial len:250 (+),score=51.46,Myb_DNA-bind_3|PF12776.3|6.6e-17 S_Transcript_80000:35-748(+)
ATGGATTATATCCTTATCTCCGTGTTATATGAGCAAATCAACCAAGGCAACAAAGCAGATGGTGATTGGAAGACACAAGCTTACCAAGCCGTTGCTCAAGAACTAAATTCAAAGATGGGTATGGACTTAAATTGGGATCAAGTAAGAAATAGAGTTAAATTGTGGAAAAAACACCATGCCACTGTTATTGAGATCCGCCAGAAAACTAAATTTTATTGGGATGAGTCACGTTGTCAGTTTGTGATTGGCAAAGAGGATGTGACCGATTGGATGGAATACTGTGAGGTGAATCTGGAAGCTAAGCCTTACAAAAACAAGCGCATAGAGAATTGGGATGATATTTGTATTTTGGTTGGAAAGGATCGGGCTACAGGTAATGAAGCCGAACAAATTGATGAATCAGCTGCCCCTATGGAGGGGGAGTTTGATGCTGACAGCTTAGCTAAGGAAAAACCAACTTCATCGTCCTCCAATAAGAAGTTGAAGAGAGATCATTTGGCGGATACACTTTTTAGTGTTGCAGAAACATTGAAGCAATATGTTGACAGCAAGAGCAACACTCAAACAAGACCTACCAACCAAGAGATACTCACTGTAGTTTCTTCGGTGCCTGGGATTGCTCGACATCAAATTCTTAGAGCGGTGAAAAAGTTCATGAATGCACCCAAAGAATTTCAGCTACTCAAGGATCTACCAGAGGATGGTCAATTGAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80000.p1 GENE.S_Transcript_80000~~S_Transcript_80000.p1 ORF type:3prime_partial len:250 (+),score=51.46,Myb_DNA-bind_3|PF12776.3|6.6e-17 S_Transcript_80000:35-748(+)
MDYILISVLYEQINQGNKADGDWKTQAYQAVAQELNSKMGMDLNWDQVRNRVKLWKKHHATVIEIRQKTKFYWDESRCQFVIGKEDVTDWMEYCEVNLEAKPYKNKRIENWDDICILVGKDRATGNEAEQIDESAAPMEGEFDADSLAKEKPTSSSSNKKLKRDHLADTLFSVAETLKQYVDSKSNTQTRPTNQEILTVVSSVPGIARHQILRAVKKFMNAPKEFQLLKDLPEDGQLN

Click here to download the sequence:
Link to NCBI Protein BLAST