Transcript Information: S_Transcript_80033.p1


Annotated TAIR IDATMG00750.1
Annotated Gene NameGAG/POL/ENV polyprotein
Annotated Gene Symbol(s)ORF119
Annotation TypeHomolog
Chromosome PositionchrM:220830-221189 | Forward length=119
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.84677731202847
Replicate 20.90256866371652
Replicate 30.83830618561821
Condition 2: 8 Hour
Replicate 11.3570702929085
Replicate 21.9321142007037
Replicate 31.8409141113393
Condition 3: 24 Hour
Replicate 10.89365432461522
Replicate 21.6482772055525
Replicate 30.57322828193446


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80033.p1 GENE.S_Transcript_80033~~S_Transcript_80033.p1 ORF type:complete len:220 (+),score=22.93,rve|PF00665.22|9.8e-16 S_Transcript_80033:552-1211(+)
ATGCGTATAATTTTTTTTAAGTCATGCAACAAATGCCAACACATGGGAAATATTTCCTCGAGAAATGAAGTGCCACAAACCACCTTCATATTTTGTGAAATCTTTGATGTGTGGGGCAATGATTTCATGGGCCCTTTTCCTAGCTCATTCAGGTACATTTACATACTTCTAGCTGTTGATTATGTATCGAAGTGGGTGGAAGCTAAACCCACAAGGACTAATGATTCAAAAGTGGTTGCATCTTTCTTGAAAGCTAACATGTTCACCAGGTTTGGAGCTCCACGGGCTTTGATAAGTAACAAAGGCACAAATTTTTGCAATCGAACAATGGATGCCATACTCAAGAAGTATCATGTCACCCACAAAGTGTCTGCAGCATACCACCCGCAACCAAATGGGCAAGCTGAAATTTCTAATAGGGAAATCAAAGCCATCCTCGAAAAGACGATCAACCCGAACTGCAAGGATTGGAGTCTGAGGCTAGAGGATGCCTTATGGGCATACAGGACAACATACAATACACGGATTGGGGTGTCCCCATATCGGTTGGTTTTTGGGAAATCTTACCATCTCCCTATTGAGTTAGAACACAAAGCATATTGGGCGATCAAGAACTTCCACATGAGTTTTGATGAAGCCGATAAACACCGAAAACTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80033.p1 GENE.S_Transcript_80033~~S_Transcript_80033.p1 ORF type:complete len:220 (+),score=22.93,rve|PF00665.22|9.8e-16 S_Transcript_80033:552-1211(+)
MRIIFFKSCNKCQHMGNISSRNEVPQTTFIFCEIFDVWGNDFMGPFPSSFRYIYILLAVDYVSKWVEAKPTRTNDSKVVASFLKANMFTRFGAPRALISNKGTNFCNRTMDAILKKYHVTHKVSAAYHPQPNGQAEISNREIKAILEKTINPNCKDWSLRLEDALWAYRTTYNTRIGVSPYRLVFGKSYHLPIELEHKAYWAIKNFHMSFDEADKHRKL*

Click here to download the sequence:
Link to NCBI Protein BLAST