Transcript Information: S_Transcript_80074.p1


Annotated TAIR IDAT2G32000.1
Annotated Gene NameDNA topoisomerase, type IA, core
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:13615999-13621563 | Reverse length=865
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7490176016429
Replicate 25.1386103140909
Replicate 34.6587676317786
Condition 2: 8 Hour
Replicate 14.7444669071721
Replicate 24.6402791500708
Replicate 34.6435450170759
Condition 3: 24 Hour
Replicate 15.1637963291787
Replicate 24.9897151790336
Replicate 33.974737009381


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80074.p1 GENE.S_Transcript_80074~~S_Transcript_80074.p1 ORF type:complete len:863 (+),score=137.85,Topoisom_bac|PF01131.16|5.4e-105,Toprim|PF01751.18|8.2e-17 S_Transcript_80074:224-2812(+)
ATGGCTCCCAAGGTTCTCATGGTAGCGGAGAAACCGAGCATTGCCTTATCAATTGCAACGGTTCTCTCTGGGGGTCAGATGTCGACTAGGAGGGGCAGTACTGAGGTGCATGAATTTGATGGAAAGTTTTTGGGGACTCGTAGTCATATTAAAGTAACTTCAGTGATTGGACATGTTTTTAGTGTAGATTTTCCTGGAACATATCAAGACTGGGCAACTACAGATCCACTGGATCTTTTCCAAGCTCCTGTTGTTAAATCAGAATCAAATCCAAAGGCTCATATCCGGAGACATTTGAGTCAAGAAGCTCGTGGTTGTAGCCATCTTGTCTTGTGGTTGGATTGTGACCGAGAAGGAGAGAATATTTGTTTTGAAGTTATTGAGTGTGCTGGTTTTTATTTCAAGGAGGGGGACACAAGAGTTTATCGTGCTCGATTTTCCTCTGTTACTGAGAAAGATATTTTGAAGGCTATGGAAAATCTTGTTCAGCCAAACAGAAATGAGGCATTGGCTGTGGATGCGCGACAAGAGATAGACTTGAAAGTTGGTGTTGCCTTTACGCGTTTTCAGACTAGTTTCTTTCAAGGCAAATACGGAAATTTGGACTCTCGAGTTATCTCTTATGGACCATGTCAAACTCCAACTCTTGGATTTTGTGTACAACGTTATTTGAATATCAACACATTTAAGCCAGAAAGGTTTTGGGTTGTGCATCCATATGTCGTGCATAAGGGTTATGAGCTAAAGTTGGAATGGGAGCGTGAAAAGCTTTTTGACTTGGATGTTGCCGTGATGTTTCAGAAACTAGTTACTGAGGATGGTGCTGTTGAAGTTATCAATGTATTTCAGAAGCAGGAGCATAAGAGTCGACCTGCTGGCTTGAATACAGTGAATCTCTTGAAGGTTGCTTCAAGTGCACTGGGCTTTGGTCCGCAGATGGCTATGCAGATAGCAGAAAGGTTGTATACTCAAGGTTTCATAAGTTATCCTCGCACAGAAAGTACATCTTATCCTTCTTCATTTGATTTCCGAGGCACACTTGAATCACAGAGGAGTAACCCACTATGGGGTGGTTATGTTCAAACATTGCTAGCTGATGGTTACCATAAGCCACGTGTTGGAACTGATGCTGGTGATCATCCACCAATTACCCCAATGCGCTCAGCAACAGAGGAGATGCTAGGCTATGATGCTTGGAAGTTGTATCAGTATGTTTGTCAACATTTTATTGGCACAGTGTCTCCGGACTGTAAATATGTCAGGACAAAGGTTGAATTTTCAACTGGTGGAGAAACTTTTCATTGTACAGGACAGTATGTCACATCCCATGGATTTACGTCCATAATGCCATGGTTGGCTATCAGTGAGAAAAAGCTTCCTGACTTTACCAAGGGGGAGAGATTAAAAATTTCAAAGGTTGAGCTGTATGAGGGAAACACTACACCTCCTGATTACCTTACCGAAAGTGAGGTCATCTCTCTCATGGAAAAGCATGGAATAGGTACAGATGCATCGATTCCTGTACACATCAACAATATATGTGAGCGCAACTATGTGCAGGTGCAAAGTGGGCGGAGGTTGGTTCCAACTGCGTTGGGTGTCACCCTTGTTAGAGGTTACCAATGTATTGATCCAGATCTCTGTTTGCCAGACATTAGAAGTTTTATTGAACATCAGATTACTCTTATTGCTAAGGGTCAAGCAGATCATTCACTGGTTGTTAAGCATGTCTTGGAACAATTCAAGCAGAAGTACGTATATTTTGTCAAACAGATTGAACATATGGATACACTGTTTGAAGCCCAATTCTCACCACTATCAGAAACAGGGCGAGCAATGAGTAAATGCGGCAAATGTCTTCGCTATATGAAGTATATTGCTCCTCAGCCATCCCGTCTCTATTGTGGTACATGCGAGGATGTCTATTATCTTCCTCAAAAGGGCTTAATCAAGCTGTACAAGGAACTCGTTTGCCCTTTGGACAACTTTGAGCTCTTGCTTTTCTCCTTGCCTGGTCCCGAAGGCAAGTCATTTCCTCTGTGCCCATACTGCTACAACAACCCTCCATTTGAAGGTATTGACACACTTTTCGGTGCTCCTAAGACTGGTCCAGCCAAACTGGGCAAGGGAGCTGGGATGCCATGCTTCCTTTGCCCACATCCTACATGCCGGCATTCTCTGACAGCTCAAGGGGTTTGTGCCTGCCCTGAATGTAGTGGAACCCTTGTACTGGATCCCGTCAGCGCTCCTAAGTGGAGGCTTTTCTGCAACATGTGCAATTGCCTAGTTTTTCTACCTCAAGGTGCACATCGGATCTCTACCACCCAAGACCGCTGTCCTGATTGCGATTCAACTATCATAGAAGTCGACTTCAATAAGAATAACACACCATTGGTAGACGGAGCTACCTTGCATGCCGGATGCATTCTGTGTGATGAGCTCCTCCATTCATTGATCGAGATGAAACATGGAAGATCATCGTTCAGGCGCTTTGGAGGTAGAGGAAGAGGTAGAGGGAGAGGGAGAGGATCGAGAGGGCGAGGTGGTAAGAAGAATGTCGACCCCAAAATGAGCTTCCGGGATTTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80074.p1 GENE.S_Transcript_80074~~S_Transcript_80074.p1 ORF type:complete len:863 (+),score=137.85,Topoisom_bac|PF01131.16|5.4e-105,Toprim|PF01751.18|8.2e-17 S_Transcript_80074:224-2812(+)
MAPKVLMVAEKPSIALSIATVLSGGQMSTRRGSTEVHEFDGKFLGTRSHIKVTSVIGHVFSVDFPGTYQDWATTDPLDLFQAPVVKSESNPKAHIRRHLSQEARGCSHLVLWLDCDREGENICFEVIECAGFYFKEGDTRVYRARFSSVTEKDILKAMENLVQPNRNEALAVDARQEIDLKVGVAFTRFQTSFFQGKYGNLDSRVISYGPCQTPTLGFCVQRYLNINTFKPERFWVVHPYVVHKGYELKLEWEREKLFDLDVAVMFQKLVTEDGAVEVINVFQKQEHKSRPAGLNTVNLLKVASSALGFGPQMAMQIAERLYTQGFISYPRTESTSYPSSFDFRGTLESQRSNPLWGGYVQTLLADGYHKPRVGTDAGDHPPITPMRSATEEMLGYDAWKLYQYVCQHFIGTVSPDCKYVRTKVEFSTGGETFHCTGQYVTSHGFTSIMPWLAISEKKLPDFTKGERLKISKVELYEGNTTPPDYLTESEVISLMEKHGIGTDASIPVHINNICERNYVQVQSGRRLVPTALGVTLVRGYQCIDPDLCLPDIRSFIEHQITLIAKGQADHSLVVKHVLEQFKQKYVYFVKQIEHMDTLFEAQFSPLSETGRAMSKCGKCLRYMKYIAPQPSRLYCGTCEDVYYLPQKGLIKLYKELVCPLDNFELLLFSLPGPEGKSFPLCPYCYNNPPFEGIDTLFGAPKTGPAKLGKGAGMPCFLCPHPTCRHSLTAQGVCACPECSGTLVLDPVSAPKWRLFCNMCNCLVFLPQGAHRISTTQDRCPDCDSTIIEVDFNKNNTPLVDGATLHAGCILCDELLHSLIEMKHGRSSFRRFGGRGRGRGRGRGSRGRGGKKNVDPKMSFRDF*

Click here to download the sequence:
Link to NCBI Protein BLAST