Transcript Information: S_Transcript_80146.p1


Annotated TAIR IDAT5G02750.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:620101-620952 | Forward length=283
E-Value9.6E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.943282129208
Replicate 216.240664535393
Replicate 314.728573955653
Condition 2: 8 Hour
Replicate 17.2565564273578
Replicate 28.1564031499003
Replicate 39.1776566077003
Condition 3: 24 Hour
Replicate 111.680944644276
Replicate 215.581370458739
Replicate 313.399211090218


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80146.p1 GENE.S_Transcript_80146~~S_Transcript_80146.p1 ORF type:complete len:288 (+),score=22.80,zf-RING_2|PF13639.2|5.1e-12,zf-RING_11|PF17123.1|4.3e-07 S_Transcript_80146:272-1135(+)
ATGGATGACCAAACCACTACTACAGAATCCATCATCATGGCTGCCCTTTCAACTCTTTCCTCTTCCCAGCTTTCCTCCCTTTGCCTCTCTCTCTCCACCACCTTCCACCGCCACCACCACCGCCACCACCACCGCCTTCTCTCTCTCCTCACCTCCCCCTCCCTCTTCACTCACACTCTCAACCACCTTTACTCCCTTTCCCTCCCTCAAAAATCCCTCCTCATTGCCAAACACCTCCTCTCCATTCTCCACCTCCTCACCCCCTCCCTCTCCCCTCTTCCCTCCCACTGCAAATTCCGCCTCTGCGACCTCGACTCCGCCCTCCTCCTCCTCTTCTTCTGCGAGGTCCGCCAGCATAGCCCCAGTGCGCTAGAGACCGCATCCCCAGCACACTGGCACGAGGTACTGAAGGAATACTGCTCTGATACCATGTTAAAATTGTCGTCAGGCCTGGCCTCCACCTCGGCAGAGGTCCTAGGGGCCTTCGTCGACGTGGTGGTAAAGTGCAGGAGATTGGTAAGCGCCAAGAGATGCGGCGGGGGCGGTGAGGCCGGCGCGAAGATCGAAGTGCCGGCATCGGTAGCCGCGGTGGTGGCGCTGCCGTCGGTGGAGGTTATGAGCGGCGGTGAAGCTGAGTGTGTGATTTGTAAAGAGGAGATGAGAGAAGGGAGGGATGTATGTCAATTGCCATGTCATCATATGTTCCACTGGATGTGTGTCCTGCCTTGGCTCAGCAAGAGGAACACGTGTCCTTGCTGCAGGTTCCGGCTACGGACTGATGACGTGTACGGCGAGATCCAACGGCTGTGGGAGGTCATAGTCAAGGCGAGTCTACAGCAATTTGATGGAGATCAATGTACCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80146.p1 GENE.S_Transcript_80146~~S_Transcript_80146.p1 ORF type:complete len:288 (+),score=22.80,zf-RING_2|PF13639.2|5.1e-12,zf-RING_11|PF17123.1|4.3e-07 S_Transcript_80146:272-1135(+)
MDDQTTTTESIIMAALSTLSSSQLSSLCLSLSTTFHRHHHRHHHRLLSLLTSPSLFTHTLNHLYSLSLPQKSLLIAKHLLSILHLLTPSLSPLPSHCKFRLCDLDSALLLLFFCEVRQHSPSALETASPAHWHEVLKEYCSDTMLKLSSGLASTSAEVLGAFVDVVVKCRRLVSAKRCGGGGEAGAKIEVPASVAAVVALPSVEVMSGGEAECVICKEEMREGRDVCQLPCHHMFHWMCVLPWLSKRNTCPCCRFRLRTDDVYGEIQRLWEVIVKASLQQFDGDQCT*

Click here to download the sequence:
Link to NCBI Protein BLAST