Transcript Information: S_Transcript_80222.p1


Annotated TAIR IDAT5G49760.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20216679-20221052 | Forward length=953
E-Value9E-298
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.3418192591835
Replicate 29.2606285886749
Replicate 310.541563900279
Condition 2: 8 Hour
Replicate 114.502190595274
Replicate 213.321198376583
Replicate 313.940841763345
Condition 3: 24 Hour
Replicate 111.822773168987
Replicate 29.0458597181083
Replicate 310.285779497097


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80222.p1 GENE.S_Transcript_80222~~S_Transcript_80222.p1 ORF type:complete len:922 (+),score=122.17,Pkinase|PF00069.21|2.2e-47,Pkinase_Tyr|PF07714.13|1.2e-46,LRR_8|PF13855.2|1.3e+02,LRR_8|PF13855.2|3.3e-07,LRR_8|PF13855.2|15,LRR_8|PF13855.2|0.0013,LRR_8|PF13855.2|4.5e-05,LRR_8|PF13855.2|5.1e-08,LRR_8|PF13855.2|0.034,LRR_4|PF12799.3|37,LRR_4|PF12799.3|0.023,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|7.3e+03,LRR_4|PF12799.3|1.2e+03,LRR_4|PF12799.3|0.53,LRR_4|PF12799.3|0.0053,LRR_4|PF12799.3|6.8 S_Transcript_80222:1749-4514(+)
ATGGTATTGTTTAAAGGTTTTCTGATTGAGCTGTTGTGGATGGTGAAATTGAATTCATTAATTTACGCAGTGGCTACGCTAAAAACTCTCAAGAGACAGTGGCAAAACACGCCTCCAAACTGGGTAAAAAATGATCCATGTGGTCGTAAATGGGAAGGCATTTACTGCAATGGCTCTCATGTTACTTCAATCTTATTAGCTGGCATAGATTTGAAGGGTTCACTGTCTAACGACATTCTATTGTTATCCGAGCTGCAAAATTTGGATCTATCAAACAATAGAGGCATGATGGGACATCTTCCAGAAAATATTGGCAGTCTGAAGAATTTAGTAAGCCTTATTCTTGTTAACTGTAATTTCTCTGGGGAAATTCCAGAGTCAATTGGATCTCTCCAGAAACTGAGGAATTTGTTCCTCAATTCTAATCACTTTACTGGACCAATACCACATTCGATAGGTAATCTCAAAAATCTTGTCTGGCTTGATCTTAGTGACAACCAGCTGAATGGAACATTACCAATTTCCAGTGAGACCAGACCCGGCCTGGATTTGCTGCTTAAAGCCAAGCACTTCCATCTTGGACAGAATAAGCTCTCTGGAGAAATTCCACCTAGACTTTTCAGCTCAAGGATGGCACTAATACATATCATTTTGAATGACAACGAGCTAAATGGAAGTATCCCAGTCACGATAGAACATGTTCTGACATTGGAGGTCATTCGTTTGGACAGTAACTTTCTAAGTGGCATTGTGCCCCAGAACCTGAGCACACTCACAAGCATGTCTGAACTCTATTTGGCAAATAACAGTCTGAGTGGTCCAGTCCCTGATCTTACAGGAATGAACCTCCTTACATATGTAGACTTGAGTAACAATAATTTCAGTGGACCTGTTCCTCAGTGGTTCAAGACATTGCCGAACTTAACCACATTATATATGGAGAACACTGGACTAAAGGGAGAAGTACCAAAAGAAATGTTTCGCTTACCTCAGTTGCAATCTGTGGTACTGAAAAACAATCAACTTAATGGTACTGTGGACATTGGCACTAGCTTCAGCAGTGGTCTTCAGCTTATAGATTTGCGAAATAATTCCATTGATGAATTTAGTTCAGGAGACTATGATAACACCATTCTACTTGATGACAATCCATTATGTACGAAGCCAGAAGCAGCCCAAATTTGCAAGACAGATGAATCACCCTTTTCGAACTTTATACCACAACAAGATAACTGTGCCCCACTATCTTGCTTTTCTGACCAAATACTTGGGTCCAATTGCAAAAGTCCATACCTCGGTAACCTGATCTTCAGATCATTTAACTTTTCTGATCTCACGAACCCATTATACTACACTTTTCTGACAAACTCGCTTCAACCTCTTCTTGCATCTCGTCACGTACCAATAGATAGAGTCTGCTTAGTTAGCTCAATGATAGATGCCGATGGTTATCTTGTGCTGAACATATCATTCTTTCCTTCTCATGATGCTTATTTTAATCGAACGGGAGTTTCTACAATTGGGAATGTCCTCAATGACCATATTTTCAACACTCCATATGGACCTTATTACTACACTGACCTGACTTATGCTGGCTTTCAAGGATCTAGCAAAAACACTGGCCTTATCATTGGATTAACTGTTTGTGGATTTGTCCTTGTGCTGCTTATAATCTCTGCTGGATTGTATGCCTATCGTCAGAGAGAGATAGCTGAAAGAGCAACTAAACTAATCAAACCTTTCTCATCCTGGAATAGAGGTAACCTTCCTCAATTGAAGGGAGCCAGATGGTTCTCATTTGAAGATGTCAAACAATGCACTGATAATTTTTCAGACAGAAGTGAGATCGGAATTGGAGGTTATGGAAAGGTTTATAAGGGTAAACTTGACACTGGACAACTAGTTGCAATTAAAAGAGCTCAACAAGGATCATTGCAAGGTGCCCATGAGTTTAAAACAGAAATCGAGCTTTTATCAAGGGTTCATCACAAGAATGTTGTTAATCTAGTTGGCTTCTGTTATGATAAAGGCGAACAAATGCTTATTTATGAATATATCCCGAATGGCAGCCTGAGAGCAGCTCTTTCAGGGAAATCTGGGGTTTGGCTAAATTGGACAAGGAGGTTAAAGGTAGCCCTTGGTGCTGCTAGAGGAATAGCATATTTGCATGAGCTTGCAGATCCACCCATCGTACACAGGGACATTAAGTCAGACAACATCTTGCTGGGTGATCATCTAAATGCCAAAGTGGCTGATTTTGGTTTGAGCAAACCCTTGAGCAATTATAAAGATCATGTCACCACCCAAGTTAAGGGGACAATGGGATACTTGGATCCCGAGTACTACATGACCCAACTGTTAACTGAGAAGAGTGATGTCTACAGCTTTGGAGTAGTGATGCTGGAGCTGGTAACTGGAAGGCCGCCACTAGAGAAAAATAAGTACATTGTAAGAGAGTTTAGGGAGACAATGAAAGAGGGTGGGAATATGTACAGCCTTGTGGACCCAGCCATTAGTTCTGACACACTGATTGGCGTGAAAGAATTTGTGTATTTAGCAATGAGGTGTCTTCAGGACTTGGGGAATAACCGGCCATCAATGGGTGAAGTGGTGAAAGAAATTGAGGATATCATTCAGGCAAGTGATTTGAATGTTGATGTTGATTCGACTTCCACTTCAGCAACCTACGAAGGAGCAAGAGACGGTGGTCATCCCTACAGCAGTGGCTCCTTCAGTAGTAGAGGGAGTGGTCCGCTTCTTCGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80222.p1 GENE.S_Transcript_80222~~S_Transcript_80222.p1 ORF type:complete len:922 (+),score=122.17,Pkinase|PF00069.21|2.2e-47,Pkinase_Tyr|PF07714.13|1.2e-46,LRR_8|PF13855.2|1.3e+02,LRR_8|PF13855.2|3.3e-07,LRR_8|PF13855.2|15,LRR_8|PF13855.2|0.0013,LRR_8|PF13855.2|4.5e-05,LRR_8|PF13855.2|5.1e-08,LRR_8|PF13855.2|0.034,LRR_4|PF12799.3|37,LRR_4|PF12799.3|0.023,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|7.3e+03,LRR_4|PF12799.3|1.2e+03,LRR_4|PF12799.3|0.53,LRR_4|PF12799.3|0.0053,LRR_4|PF12799.3|6.8 S_Transcript_80222:1749-4514(+)
MVLFKGFLIELLWMVKLNSLIYAVATLKTLKRQWQNTPPNWVKNDPCGRKWEGIYCNGSHVTSILLAGIDLKGSLSNDILLLSELQNLDLSNNRGMMGHLPENIGSLKNLVSLILVNCNFSGEIPESIGSLQKLRNLFLNSNHFTGPIPHSIGNLKNLVWLDLSDNQLNGTLPISSETRPGLDLLLKAKHFHLGQNKLSGEIPPRLFSSRMALIHIILNDNELNGSIPVTIEHVLTLEVIRLDSNFLSGIVPQNLSTLTSMSELYLANNSLSGPVPDLTGMNLLTYVDLSNNNFSGPVPQWFKTLPNLTTLYMENTGLKGEVPKEMFRLPQLQSVVLKNNQLNGTVDIGTSFSSGLQLIDLRNNSIDEFSSGDYDNTILLDDNPLCTKPEAAQICKTDESPFSNFIPQQDNCAPLSCFSDQILGSNCKSPYLGNLIFRSFNFSDLTNPLYYTFLTNSLQPLLASRHVPIDRVCLVSSMIDADGYLVLNISFFPSHDAYFNRTGVSTIGNVLNDHIFNTPYGPYYYTDLTYAGFQGSSKNTGLIIGLTVCGFVLVLLIISAGLYAYRQREIAERATKLIKPFSSWNRGNLPQLKGARWFSFEDVKQCTDNFSDRSEIGIGGYGKVYKGKLDTGQLVAIKRAQQGSLQGAHEFKTEIELLSRVHHKNVVNLVGFCYDKGEQMLIYEYIPNGSLRAALSGKSGVWLNWTRRLKVALGAARGIAYLHELADPPIVHRDIKSDNILLGDHLNAKVADFGLSKPLSNYKDHVTTQVKGTMGYLDPEYYMTQLLTEKSDVYSFGVVMLELVTGRPPLEKNKYIVREFRETMKEGGNMYSLVDPAISSDTLIGVKEFVYLAMRCLQDLGNNRPSMGEVVKEIEDIIQASDLNVDVDSTSTSATYEGARDGGHPYSSGSFSSRGSGPLLR*

Click here to download the sequence:
Link to NCBI Protein BLAST