Transcript Information: S_Transcript_80235.p1


Annotated TAIR IDAT5G57580.1
Annotated Gene NameCalmodulin-binding protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23314994-23317683 | Reverse length=647
E-Value7E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.885747121887
Replicate 22.0733705849231
Replicate 31.7776131164916
Condition 2: 8 Hour
Replicate 13.7512132365077
Replicate 23.2344841406834
Replicate 34.8795313794536
Condition 3: 24 Hour
Replicate 13.4214877756352
Replicate 22.6759681138338
Replicate 33.5857846262695


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80235.p1 GENE.S_Transcript_80235~~S_Transcript_80235.p1 ORF type:complete len:415 (+),score=77.32,Calmodulin_bind|PF07887.7|1.6e-83 S_Transcript_80235:1378-2622(+)
ATGAATCGCAGGGCTGAAAATTGGTTGATGTTGCTGGGGTGGGGTTTGAGATGGAGGGCATTGCCAAATGAAGCTCAGCAAACTGAATCAAAAAAGTTCAAGTTGCACTTTGAGGGCAAGTTACCTTCTAGGCTATATACTGGAAACAATATAACAGCTGAGGGGCCTGTGCCTATCAAACTAGAGTTACAAGATGCACTATCAGGGCGTATTGTAGCAAATGGTCCCTCGTCTTTGCTAAAAGTCGAAATTGTGGCTCTACACGGCCATTTCAAGGCCGAGCAACTAGAGGAATGGACACAGAGCGATTTTGATGACAATATTGTACACGCGAGGGATGGTAAAAGGCCACTGTTGGTTGGGGAATGTGTAATTGCTTTGCATAATGGAATTGGCTTCATTGATGGGATTAACTTCACTGACAACTCTAGTTGGGTTAGAAGCAAAAAATTTCGGTTGGGTGCAAGAGTGCTTAAAGATGATCAAGTAAAGGAAGCTGTGAGTGGTCCTTTTGAAGTTAAAGATCGTCGTGGAGAGATTTATCAGAAGCATGACACTCCATCACTGGAAGATGAGGTGTGGCGTTTGCACAAGATAGCAAAAGATGGGAAAATCTGTAAAAGGCTTGCAGAGCATCAAATTTTCAATGTCAGGGATTTCCTAAAACAGTATCAAATTGATCAGAACTTGCTGCGCCAAATTCTAAATGTGTCACCTAAAGTTTGGGAAGCAATAGCTCAACAAGCTAATTTATGCTTATCAAGCAATGTGCAGCTCGAACAGCCAAGTAATTTGACGACAACTAATATTCTTCCTACTGTGCCGTTAAGCCAAATTAGGACTCCAAATCCGGCCCTGCAGAATTTGTATGGCCCTGCAGCAAGTCAAGATGAACCAGAGATTTCAATTATGTCGTATAATCATTCCATGTCTCTAAATGAAGAACCCGCACAGCTGAATCCATCCACGTATATTGGCAACAATTCTTTTGTAACCGAGGGTTTTGCTGGAGACCTAGATCAGCCTGCAGGACCATCCGATCCAGTGTATGGACAGGACATGTTCAATGATGTTCGTGCAGCCTCAAACTGGGTTTCCATTGCTCAACCAGCACCAAATTATGATCACCTCGGAATGTCTGTTCCCTCTACAATTACCCTTAATATGCAGGATCCTAGCCCAAGTACTAGTTCCGGCATTGCTATGCCTAAAGCTGCTGGTTGGAGTCGGATTCCAGCTGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80235.p1 GENE.S_Transcript_80235~~S_Transcript_80235.p1 ORF type:complete len:415 (+),score=77.32,Calmodulin_bind|PF07887.7|1.6e-83 S_Transcript_80235:1378-2622(+)
MNRRAENWLMLLGWGLRWRALPNEAQQTESKKFKLHFEGKLPSRLYTGNNITAEGPVPIKLELQDALSGRIVANGPSSLLKVEIVALHGHFKAEQLEEWTQSDFDDNIVHARDGKRPLLVGECVIALHNGIGFIDGINFTDNSSWVRSKKFRLGARVLKDDQVKEAVSGPFEVKDRRGEIYQKHDTPSLEDEVWRLHKIAKDGKICKRLAEHQIFNVRDFLKQYQIDQNLLRQILNVSPKVWEAIAQQANLCLSSNVQLEQPSNLTTTNILPTVPLSQIRTPNPALQNLYGPAASQDEPEISIMSYNHSMSLNEEPAQLNPSTYIGNNSFVTEGFAGDLDQPAGPSDPVYGQDMFNDVRAASNWVSIAQPAPNYDHLGMSVPSTITLNMQDPSPSTSSGIAMPKAAGWSRIPAV*

Click here to download the sequence:
Link to NCBI Protein BLAST