Transcript Information: S_Transcript_80246.p1


Annotated TAIR IDAT5G57580.1
Annotated Gene NameCalmodulin-binding protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:23314994-23317683 | Reverse length=647
E-Value3E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6109564912337
Replicate 22.2436735143235
Replicate 31.6075992712097
Condition 2: 8 Hour
Replicate 14.7504501432839
Replicate 23.7376696274604
Replicate 32.6838355337991
Condition 3: 24 Hour
Replicate 13.0678044611488
Replicate 21.7560338267388
Replicate 32.6870943191891


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80246.p1 GENE.S_Transcript_80246~~S_Transcript_80246.p1 ORF type:complete len:413 (+),score=75.11,Calmodulin_bind|PF07887.7|1.4e-83 S_Transcript_80246:1728-2966(+)
ATGTCAAATCATGAGCTTAAAAGTCTAAGATTCCTCTGTCCCAGGGCATTGCCAAATGAAGCTCAGCAAACTGAATCAAAAAAGTTCAAGTTGCACTTTGAGGGCAAGTTACCTTCTAGGCTATATACTGGAAACAATATAACAGCTGAGGGGCCTGTGCCTATCAAACTAGAGTTACAAGATGCACTATCAGGGCGTATTGTAGCAAATGGTCCCTCGTCTTTGCTAAAAGTCGAAATTGTGGCTCTACACGGCCATTTCAAGGCCGAGCAACTAGAGGAATGGACACAGAGCGATTTTGATGACAATATTGTACACGCGAGGGATGGTAAAAGGCCACTGTTGGTTGGGGAATGTGTAATTGCTTTGCATAATGGAATTGGCTTCATTGATGGGATTAACTTCACTGACAACTCCAGTTGGGTTAGAAGCAAAAAGTTTCGGTTGGGTGCAAGAGTGCTTCTAGCCAAAGATGATCAAGTAAAGGAAGCTGTGAGTGGTCCTTTTGAAGTTAAAGATCGTCGTGGAGAGATTTATCAGAAGCATGACACTCCATCACTGGAAGATGAGGTGTGGCGTTTGCACAAGATAGCAAAAGATGGGAAAATCTGTAAAAGGCTTGCAGAGCATCAAATTTTCAATGTCAGGGATTTCCTAAAACAGTATCAAATTGATCAGAACTTGCTGCGCCAAATTCTAAATGTGTCACCTAAAGTTTGGGAAGCAATAGCTCAACAAGCTAATTTATGCTTATCAAGCAATGTGCAGCTCAAAGAGCCAAGTAATTTGGTGACAACTAATATTCTTCCTAATGTGCCGTTAAGCCAAATTAGGACTCCAAATCCGGCCCTGCAGAATTTGTATGGCCCTGCAGCAAGTCAAGATGAACCAGAGATTTCAATTATGTCATATAATCATTCTATGTATCTAAATGAAGAACCCGCACTGCTGAATCCATCCGCGTATATTGGCAACAATTCCTTTGTAACCAAGGCTTTTGCTGGAGGCCTAGATCAGCCTGCAGGACCATCCGATCCAGTGTATGGACAGGACATGTTCAATGATGTTCGTGCAGCCTCAAACTGGGTTTCCATTGCTCAACCAGCACCAAATTATGATCACCTCGGAATGTCTGTTCCCTCTACAATTACCCTTAATATGCAGGATCCTAGCCCAAGTACTAGTTCCGGCATTGCTATGCCTAAAGCTGCTGGTTGGAGTCGGATTCCAGCTGTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80246.p1 GENE.S_Transcript_80246~~S_Transcript_80246.p1 ORF type:complete len:413 (+),score=75.11,Calmodulin_bind|PF07887.7|1.4e-83 S_Transcript_80246:1728-2966(+)
MSNHELKSLRFLCPRALPNEAQQTESKKFKLHFEGKLPSRLYTGNNITAEGPVPIKLELQDALSGRIVANGPSSLLKVEIVALHGHFKAEQLEEWTQSDFDDNIVHARDGKRPLLVGECVIALHNGIGFIDGINFTDNSSWVRSKKFRLGARVLLAKDDQVKEAVSGPFEVKDRRGEIYQKHDTPSLEDEVWRLHKIAKDGKICKRLAEHQIFNVRDFLKQYQIDQNLLRQILNVSPKVWEAIAQQANLCLSSNVQLKEPSNLVTTNILPNVPLSQIRTPNPALQNLYGPAASQDEPEISIMSYNHSMYLNEEPALLNPSAYIGNNSFVTKAFAGGLDQPAGPSDPVYGQDMFNDVRAASNWVSIAQPAPNYDHLGMSVPSTITLNMQDPSPSTSSGIAMPKAAGWSRIPAV*

Click here to download the sequence:
Link to NCBI Protein BLAST