Transcript Information: S_Transcript_80259.p1


Annotated TAIR IDAT5G54080.1
Annotated Gene Namehomogentisate 1,2-dioxygenase
Annotated Gene Symbol(s)HGO
Annotation TypeOrtholog
Chromosome Positionchr5:21945920-21948070 | Forward length=461
E-Value4.2E-277
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.247618043835
Replicate 221.269835175955
Replicate 325.773041334588
Condition 2: 8 Hour
Replicate 127.547174384288
Replicate 228.425964127856
Replicate 327.534847540473
Condition 3: 24 Hour
Replicate 130.25031434744
Replicate 220.843040244632
Replicate 319.676394049657


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80259.p1 GENE.S_Transcript_80259~~S_Transcript_80259.p1 ORF type:complete len:473 (+),score=77.10,HgmA|PF04209.9|1e-204 S_Transcript_80259:450-1868(+)
ATGACTAAGTCAGCACCTTCAACAATGGTGGAAGTTGATAACTTTGCAGAAGATTTGGAGTACCTGAGTGGATTTGGGAACCATTTGTCATCAGAAGCTATGGAAGGAGCTCTACCAGTTGGGCAGAACAACCCTCTGATATGCCCTTATGGCCTTTATGCTGAGCAGATTTCTGGCACTTCCTTCACTGCTCCTCGCAAGCTCAACCTCCGAAGTTGGTTATACCGTATTAAGCCGTCAGTTACACATGAACCGTTCAAGCCTCGTGTTCCTGGCAATGAGAAACTAGTTGCAGAATTTAACCAGTCCAACAGCTCTGCTAACCCAACCCAACTACGGTGGAAGCCTATAGATATTCCTGAAGATCCAACTGATTTTATTGATGGTTTGCAAACTATTTGTGGAGCAGGCAGTTCGTATCTCCGGCATGGATATGCAGTTCACATGTACACTGCCAACAAATCAATGGATAACTGTGCCTTCTGCAATGCTGATGGTGATTTCTTGTTCGTCCCTCAAAAAGGAAGTACGTACCGTCCTTCTGTTCACACATTGTGGTTTACAGGGCTATGGATCACTACTGAGTGTGGAAGATTGCAAGTTTCTCCTGGTGAAGTTGCTGTTGTGCCTCAAGGATTTCGTTTTGCTATCAGCTTGCCTGATGGTCCATCACGTGGTTATGTTGCTGAGATATTTGGGGCGCATTTTCATCTTCCAGATCTGGGCCCAATAGGTGCGAATGGTTTAGCTTCTGCAAGACATTTCCTCGTGCCTACTGCTTGGTTTGACAAGAGTACCTGTCCAAATTACACAATTGTACAAAAATATGGCGGGGAGTTATTCACCGCAAAACAAGATTTCTCTCCCTTCAATGTGGTTGCTTGGCATGGTAACTATGTCCCATGTAAGTATGATTTGAGCAAGTTTTGTCCTTTCAATACTGTATTGGTGGATCACGGGGATCCATCGATAAATACAGTGCTAACTGCCCCGACAGAGAAGCCTGGTGTGGCATTACTTGATTTTGTTATTTTCCCCCCAAGGTGGCTGGTTGCTGAGCACACCTTCAGACCTCCTTATTACCACCGCAATTGTATGAGTGAATTTATGGGTCTGATTTACGGTGATTATGAGGCAAAGGCTGACGGGTTTCTCCCTGGGGGTGCGAGTCTACATAGTTGCATGACACCACATGGTCCAGATACTAAGACTTATGAGGCAAATATTGCCCGAGGGGAGAACACAGGACCAAGCAAAATTACAGACACTATGGCATTCATGTTTGAATCATATCTCATCCCTCGAGTTTGCCCGTGGGCTCTCGAGTCTCCGTTCCTGGATGAGGATTACTACCAGTGCTGGATTGGACTGAAATCTCATTTTGGTGAAGAGCAAACTTCTAATAGCTCCACTGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80259.p1 GENE.S_Transcript_80259~~S_Transcript_80259.p1 ORF type:complete len:473 (+),score=77.10,HgmA|PF04209.9|1e-204 S_Transcript_80259:450-1868(+)
MTKSAPSTMVEVDNFAEDLEYLSGFGNHLSSEAMEGALPVGQNNPLICPYGLYAEQISGTSFTAPRKLNLRSWLYRIKPSVTHEPFKPRVPGNEKLVAEFNQSNSSANPTQLRWKPIDIPEDPTDFIDGLQTICGAGSSYLRHGYAVHMYTANKSMDNCAFCNADGDFLFVPQKGSTYRPSVHTLWFTGLWITTECGRLQVSPGEVAVVPQGFRFAISLPDGPSRGYVAEIFGAHFHLPDLGPIGANGLASARHFLVPTAWFDKSTCPNYTIVQKYGGELFTAKQDFSPFNVVAWHGNYVPCKYDLSKFCPFNTVLVDHGDPSINTVLTAPTEKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGDYEAKADGFLPGGASLHSCMTPHGPDTKTYEANIARGENTGPSKITDTMAFMFESYLIPRVCPWALESPFLDEDYYQCWIGLKSHFGEEQTSNSSTV*

Click here to download the sequence:
Link to NCBI Protein BLAST