Transcript Information: S_Transcript_80302.p1


Annotated TAIR IDAT2G17650.1
Annotated Gene NameAMP-dependent synthetase and ligase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:7671041-7672936 | Forward length=603
E-Value6E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7169678216246
Replicate 20.99638404453293
Replicate 32.4986932758427
Condition 2: 8 Hour
Replicate 13.8523285734176
Replicate 23.6083626838269
Replicate 32.6129103515784
Condition 3: 24 Hour
Replicate 13.2414988405398
Replicate 22.6319265056403
Replicate 31.464505804168


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80302.p1 GENE.S_Transcript_80302~~S_Transcript_80302.p1 ORF type:internal len:155 (-),score=6.33,AMP-binding|PF00501.24|1.5e-09 S_Transcript_80302:3-464(-)
CTTCTCTTTATCCTTGCTCTTCTCTTTTCCTCTCTCTCTCAAATGAACCACATGTTTAGATTAACTCAACTCTCATCCTATACCAAACCCAAACCCAAACCCACCCAACTCTTTCCTTCCTTGAATGGTAATATTCGATTACTTTTTCTCTCCTCCTATTATTCCTCTTCAGCAACCGAACCGGAACCGGAACGTGAAACGGAAGCCGGGTCATGGAAGTCCATAGACGGTCTAATGAGATGTTCAGCCAATTATACTCCGTTGACCCCACTCTCTTTCCTAGACCGGTCCGCTAAGGTGTTTCCGGACCGAATCTCCCTGGTTTACTCCGCCTCGACCGGTGCCCAACAAAGTTGGACATGGAAAGAGACTCGTGAGCGCTGCCTCAAGCTGGCTTCCTCTCTCATCCACCATCTTGGGCTTTCCAAAGGCCATGTTGTTGCAGTACTGGCTCCCAATGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80302.p1 GENE.S_Transcript_80302~~S_Transcript_80302.p1 ORF type:internal len:155 (-),score=6.33,AMP-binding|PF00501.24|1.5e-09 S_Transcript_80302:3-464(-)
LLFILALLFSSLSQMNHMFRLTQLSSYTKPKPKPTQLFPSLNGNIRLLFLSSYYSSSATEPEPERETEAGSWKSIDGLMRCSANYTPLTPLSFLDRSAKVFPDRISLVYSASTGAQQSWTWKETRERCLKLASSLIHHLGLSKGHVVAVLAPNV

Click here to download the sequence:
Link to NCBI Protein BLAST