Transcript Information: S_Transcript_80304.p2


Annotated TAIR IDAT5G49800.1
Annotated Gene NamePolyketide cyclase/dehydrase and lipid transport superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:20234771-20236135 | Reverse length=242
E-Value1.7E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.523765287144
Replicate 212.143804336279
Replicate 38.4464631643381
Condition 2: 8 Hour
Replicate 16.092968662038
Replicate 25.7339612059803
Replicate 39.3144880290675
Condition 3: 24 Hour
Replicate 18.0770997780348
Replicate 215.140949750585
Replicate 314.836496708892


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80304.p2 GENE.S_Transcript_80304~~S_Transcript_80304.p2 ORF type:complete len:238 (+),score=37.94,START|PF01852.15|5.9e-11 S_Transcript_80304:3159-3872(+)
ATGAGTAGTCCTGTACCATGTAGTCGATCCTGGTCTATAAGTGAAGATTCACTGAAAAGATATGTGCATTATGCAAGTGAGAGCTGCATACAAGAACTGCTCTCAGCTTCGGATTCGAGCAGGAATGGAAATGGGAGTGATGGGTGGAAGGTTTTGTCGTTCGAAGACGGGATTGAGATCTCGAAGAGACGATCAGGATCGTTACATATCTTTCGTAGCAGGTGGCTGCTCAAATCAGTCTCTCCGCAGCAGTTCTTTGCTGTGGCTAACGCCATTGATGCTGCTAAGCAATGGGACTCTGATTTAGTGGAGGCAAGATACATAAAGGATCTAGAGGATAATTTGAGCATAATACGTCTAAGGTTTGGAGAAGCCTCCAAACCCCTGTTCAAGAACAGAGAATTCATTGTTTATGAACGGCGAGAAATGATGGATGATAGCACCCTGGTGGTTGCAGTAGCTTCACTTCCAAAACAGATAGCAGCTGGATTATATCCTAAGCAAAACAATGCAATTAGAGGGTTACTGTTGCAATCTGGATGGGTTGTAGAGGAGCTTGAGGGTGATTCCTGTATGGTAACCTATGTTGTTCAGCTAGATCCAGCAGGATGGCTTCCCAAGTTCTTTGTCAATCGGCTAAACACAAAACTTGTAATGATTATTGAAAATCTAAAACAACTAGCACAAAGTACTCCAATTGATGGAGCAATATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80304.p2 GENE.S_Transcript_80304~~S_Transcript_80304.p2 ORF type:complete len:238 (+),score=37.94,START|PF01852.15|5.9e-11 S_Transcript_80304:3159-3872(+)
MSSPVPCSRSWSISEDSLKRYVHYASESCIQELLSASDSSRNGNGSDGWKVLSFEDGIEISKRRSGSLHIFRSRWLLKSVSPQQFFAVANAIDAAKQWDSDLVEARYIKDLEDNLSIIRLRFGEASKPLFKNREFIVYERREMMDDSTLVVAVASLPKQIAAGLYPKQNNAIRGLLLQSGWVVEELEGDSCMVTYVVQLDPAGWLPKFFVNRLNTKLVMIIENLKQLAQSTPIDGAI*

Click here to download the sequence:
Link to NCBI Protein BLAST