Transcript Information: S_Transcript_80342.p1


Annotated TAIR IDAT1G43722.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16496403-16497377 | Forward length=324
E-Value5E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9670479173829
Replicate 20.38370068795678
Replicate 31.5235303721235
Condition 2: 8 Hour
Replicate 11.6689435900365
Replicate 21.5563025140679
Replicate 31.575519170803
Condition 3: 24 Hour
Replicate 12.754354874901
Replicate 23.0546876472468
Replicate 32.3028823152497


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80342.p1 GENE.S_Transcript_80342~~S_Transcript_80342.p1 ORF type:3prime_partial len:230 (+),score=30.36 S_Transcript_80342:1468-2154(+)
ATGGAGGAGGATGAAAGCGGTGAAGAAGAGTTACTACTTCAAAAACGACAAGAAACGGGGAAGCTACTTTCACTCGTTGCTACAGGGGTAGTGATTTGTGCTCAATATCACATGAAGTACCTAATGAAACAACAGGTTAGAACTTCTGTTTGCTCTGGTTGGCAGTTTCTAAAGGAAGTTCTGAACACACATGGTGAATGTTATCGAATGCTTAGAATGGAACCACAAGTATTTCTTAAATTGGCTGATATATTAGTGACTAATTATGGTTTACAATCAACTAGGGTCATGCATGCACACGAGGCATTAGCTATGTTTTTATGGGTTTGTGCACATGGACACTCAAATCGTAATGTCCAGTCTAGATTTAAACATTCGGGAGAAACTGTTAGTAGAAAATTTGATGAGGTTTTGAAGTCTTTGGTTGCTTTTTCTAGAGATATTATACAACCACCTGATAGACAGTTTAGAGATGTTCCAAGCAAGATACGTAAAAATTATAAATATTGGCCACATTTTAGAGGGTGTATTGGGGCTATTGACGGTACTCATGTTCGTGTTGTGATAATTCCTAAGGAGGATGAAGTTACATACATTGGTAGAAAGACTTACCCAACACAAAATGTGATGGCAATTGTGACTTTGATATGCTGTTCACCTTTGTTCAAACTGGCTGGGAGGGTTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80342.p1 GENE.S_Transcript_80342~~S_Transcript_80342.p1 ORF type:3prime_partial len:230 (+),score=30.36 S_Transcript_80342:1468-2154(+)
MEEDESGEEELLLQKRQETGKLLSLVATGVVICAQYHMKYLMKQQVRTSVCSGWQFLKEVLNTHGECYRMLRMEPQVFLKLADILVTNYGLQSTRVMHAHEALAMFLWVCAHGHSNRNVQSRFKHSGETVSRKFDEVLKSLVAFSRDIIQPPDRQFRDVPSKIRKNYKYWPHFRGCIGAIDGTHVRVVIIPKEDEVTYIGRKTYPTQNVMAIVTLICCSPLFKLAGRVL

Click here to download the sequence:
Link to NCBI Protein BLAST