Transcript Information: S_Transcript_80342.p2


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value5E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2235289066918
Replicate 24.3074970088481
Replicate 34.1276599806154
Condition 2: 8 Hour
Replicate 13.9604296303247
Replicate 23.6221088273843
Replicate 34.4661775934247
Condition 3: 24 Hour
Replicate 15.6172557547242
Replicate 25.0723768766111
Replicate 33.0026243339424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80342.p2 GENE.S_Transcript_80342~~S_Transcript_80342.p2 ORF type:complete len:210 (+),score=47.76 S_Transcript_80342:438-1067(+)
ATGCAGGTTGATCCTGAAATCACTAAGTTTCATGAACGTGGACTAGAAAATTTGACAGAGATAGAAATAGTGTTTGACAAGACTTTTGCAACTGGTGATAAACAATGGGATCCATATACTTCAATGGATGATGTATTGGATGAAGCTGAGTTTGAAACTGGTAGTGACAATTACAATACGGGTGATAATGCTTTGGACAATACTCAACATGTGTCTTTTGGAGAGGAAGGTGAATGTAGAGATAATCTTGGTAAGAAGAAAAAGCCATACCTTAATGATGAAGGGAAGGCAAAGAAGTCTAAAGCAAGTAAAAAATCAAAAGTAGGGACTGCCATGCAAATGCAAAATCAACTCAATCGGATTTGTGATGCTGTTGAGAGCTACACTTCTCAGTCTACTGTGTCTTCTAGACTGAGTGATCTACCTGGATGTAGCATTGGAGAATGCATGACCTTGTTGAAAACGCTTACAAACACTGGGCTTGGGAGTGAATTGTTTATGTTTGCTGCTCGTTTGTTCATAAAAAAAGAGTACAGAGAGATGTTTATAGCATTGGAGGATAATGGTATAAGAGAAACTTGGCTAGAACAAGAGTACAAGTTTGACAAGAGTCGTTCTACTCATCGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80342.p2 GENE.S_Transcript_80342~~S_Transcript_80342.p2 ORF type:complete len:210 (+),score=47.76 S_Transcript_80342:438-1067(+)
MQVDPEITKFHERGLENLTEIEIVFDKTFATGDKQWDPYTSMDDVLDEAEFETGSDNYNTGDNALDNTQHVSFGEEGECRDNLGKKKKPYLNDEGKAKKSKASKKSKVGTAMQMQNQLNRICDAVESYTSQSTVSSRLSDLPGCSIGECMTLLKTLTNTGLGSELFMFAARLFIKKEYREMFIALEDNGIRETWLEQEYKFDKSRSTHR*

Click here to download the sequence:
Link to NCBI Protein BLAST