Transcript Information: S_Transcript_80488.p1


Annotated TAIR IDAT5G16260.1
Annotated Gene NameRNA binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)ELF9
Annotation TypeOrtholog
Chromosome Positionchr5:5311363-5315496 | Forward length=519
E-Value4.6E-208
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.08451049186
Replicate 214.353590889734
Replicate 313.707438981054
Condition 2: 8 Hour
Replicate 115.108915533567
Replicate 214.252336006003
Replicate 313.867646028723
Condition 3: 24 Hour
Replicate 118.007268823328
Replicate 216.669714692255
Replicate 314.315214392093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80488.p1 GENE.S_Transcript_80488~~S_Transcript_80488.p1 ORF type:complete len:518 (+),score=163.66,RRM_1|PF00076.18|1.3e-07,RRM_1|PF00076.18|5.6e-09,DUF4339|PF14237.2|4.8e-16,DUF4339|PF14237.2|1e+03,RRM_5|PF13893.2|3.5,RRM_5|PF13893.2|3.2e-08,RRM_6|PF14259.2|0.00041,RRM_6|PF14259.2|0.059 S_Transcript_80488:327-1880(+)
ATGTCGTTTACTGATGGTTCTTCAACCTCACAGCAACCTCCCACTGGCATGGTGAGCACAATAAACGAGAATTTGCAAACAAATACTGAAGTTGGGTGGTATATTCTTGATGGAAACCAGCAGCAGATTGGGCCCTACACAATATTGGAGTTGAGGGAACATTTTGTGAATGGATATCTGACAGAGAACACCCTTGTATGGGCTGAAGGAAGATCTGATTGGCAGCCACTGTCATCAGTTCCAGAGTTAATGACTGGAGTCTATTGTCACGGAACTGAATCTTCAGCTTCAACTGAGGAGGTTCCTTCTAATGTTTTTCCAAGTGAGACAAGACATACATATAGTAAGTCTACAGCAGCACCGACCAACGATGATGATGAGTTTGAGAAATTCCAGAAGGAAGTGAAAAAGGCAGAGGCTGAAGCTGAGATGCTGAAAAATGGCTCTGCTTCAGGTGATATAGATGGCATTGATCTAGATAGACCATCAACACCACCTGAGGGAGAGGATGAATTTACTGATGATGATGGGACTAGGTATAAGTGGGACCGCAATCTGAGAGCCTGGGTGCCACAGGATACTGAAGCCAGTGAAAAGGAGGGATATGGATTAGATGAGATGACATTTTTCAAAGAAGAGGAGGTATTCCCAACACTTCCAGTTGATGATGCTGTTGAAAATGAAGGAGAAAAAAGTGTCAGTGGACCTGTGGAAGAAGAAGACTCCAAACAAAGTGCAAAGAGAAAAGAACCAGAAAAGAAGAGTGAAAAAAAGGAAGCAAACAAACCACCTGACAGTTGGTTCGAGTTAAAACACAACACACATGTCTATGTGACGGGATTGCCAGATGATGTCACTTTTGACGAAGTGGTGGAGGTTTTTTCCAAGTGTGGCATTATAAAGGAGGATCCTGAGACCAAAAAGCCCCGTGTGAAGCTCTATTTTGACAAGAAGACAGGACGGAAGAAGGGAGATGCTCTTGTTACTTACCTTAAGGAGCCATCTGTAGCCTTGGCAATCCAATTATTGGACGGAACGCCTTTTCGACTTGGAGGAAAAGTTCCTATGTCAGTATCCCAAGCAAAATTTGAACAGAAAGGGGAGAAATTTATTCCGAAACAAACAGATAAGAGGAAGAAAATGAAACTAAAGAAGGTTGAAGACAAGATGCTTGGATGGGGTGGTCGTGATGATGCAAAACTTATGATTCCAGCTACCATTGTCCTCAGTAATATGTTTACACCTGCAGAAATGAGAGAAGATTTAAATTTACGTGATGAATTGGAGGCAGATGTCCGAGAGGAATGTGTCAAGCTTGGTCCAGTGGATTCAGTCAAGGTCTGTGAGAATAACCCACATGGAGTCGTGTTGGTAAGATACAAGGACAGAAAAGATGCCCAGAAGTGTATACAATTGATGAATGGAAGATGGTTTGGTGGGAAACAAATACATGCTGTTGAAGATGATGGTTCTGTCAACCATGCTTTGCTGCGGGACTACAGCGATGAAGAGGAACGGCTAGAGAAGTTTGCTGCAGAGCTTGAGGCTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80488.p1 GENE.S_Transcript_80488~~S_Transcript_80488.p1 ORF type:complete len:518 (+),score=163.66,RRM_1|PF00076.18|1.3e-07,RRM_1|PF00076.18|5.6e-09,DUF4339|PF14237.2|4.8e-16,DUF4339|PF14237.2|1e+03,RRM_5|PF13893.2|3.5,RRM_5|PF13893.2|3.2e-08,RRM_6|PF14259.2|0.00041,RRM_6|PF14259.2|0.059 S_Transcript_80488:327-1880(+)
MSFTDGSSTSQQPPTGMVSTINENLQTNTEVGWYILDGNQQQIGPYTILELREHFVNGYLTENTLVWAEGRSDWQPLSSVPELMTGVYCHGTESSASTEEVPSNVFPSETRHTYSKSTAAPTNDDDEFEKFQKEVKKAEAEAEMLKNGSASGDIDGIDLDRPSTPPEGEDEFTDDDGTRYKWDRNLRAWVPQDTEASEKEGYGLDEMTFFKEEEVFPTLPVDDAVENEGEKSVSGPVEEEDSKQSAKRKEPEKKSEKKEANKPPDSWFELKHNTHVYVTGLPDDVTFDEVVEVFSKCGIIKEDPETKKPRVKLYFDKKTGRKKGDALVTYLKEPSVALAIQLLDGTPFRLGGKVPMSVSQAKFEQKGEKFIPKQTDKRKKMKLKKVEDKMLGWGGRDDAKLMIPATIVLSNMFTPAEMREDLNLRDELEADVREECVKLGPVDSVKVCENNPHGVVLVRYKDRKDAQKCIQLMNGRWFGGKQIHAVEDDGSVNHALLRDYSDEEERLEKFAAELEAE*

Click here to download the sequence:
Link to NCBI Protein BLAST