Transcript Information: S_Transcript_80496.p2


Annotated TAIR IDAT5G43745.1
Annotated Gene NameProtein of unknown function (DUF1012)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17569435-17574954 | Reverse length=817
E-Value2.2E-71
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7925855754267
Replicate 22.4006144078125
Replicate 32.8667465414923
Condition 2: 8 Hour
Replicate 14.7512527649571
Replicate 23.9411546826461
Replicate 32.8715649623291
Condition 3: 24 Hour
Replicate 13.8483214439389
Replicate 22.9357268881279
Replicate 34.4432617086733


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80496.p2 GENE.S_Transcript_80496~~S_Transcript_80496.p2 ORF type:complete len:193 (+),score=26.43,Castor_Poll_mid|PF06241.8|1.3e-05 S_Transcript_80496:2436-3014(+)
ATGAATGGTCTACATGCATGGCCACTGTATTCTCTCAAGATCCCGGATAAGTTTGGAGCCTCTAGACCCATTGTGTACATGGACAGCCAAAACAAAAATTGTTTACGCCTTTTTTGGCTTTTATCTATAAGAATGGTGTCTCTATACCTAAGCTACTCCTTGGGTTGCTTACAGGTGCAAAATTTTGTGGCTGAAATTGTTGACTCTAAACTTGGCAAACAAATTTCAAAAATCAAGCCATCACTCACCTTCATTGCCGCGGAGGAAGTGATGAGCCTTGTTACTGCCCACGTTGCGGAGAACAGTGAATTGAACGAAGTGTGGAAAGATATTTTGAATGCTGAAGGTGATGAAATATACGTCAAGGATATTAGCTTATACATGAAAGAGGGAGAAACCCCATCTTTCTATGAGCTGTCTGAAAGAGCTTGTCTGCGGCGTGAAGTAGCGATTGGCTATGTTAAAAACAACAAGAAGATTATAAATCCAAATCCCAAATCAGAACCTCTCAACCTTGAGATGACCGATTCCCTCATCGTGATTTCGGAATTTGAAGGAGAGCAACCCATTGTCCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80496.p2 GENE.S_Transcript_80496~~S_Transcript_80496.p2 ORF type:complete len:193 (+),score=26.43,Castor_Poll_mid|PF06241.8|1.3e-05 S_Transcript_80496:2436-3014(+)
MNGLHAWPLYSLKIPDKFGASRPIVYMDSQNKNCLRLFWLLSIRMVSLYLSYSLGCLQVQNFVAEIVDSKLGKQISKIKPSLTFIAAEEVMSLVTAHVAENSELNEVWKDILNAEGDEIYVKDISLYMKEGETPSFYELSERACLRREVAIGYVKNNKKIINPNPKSEPLNLEMTDSLIVISEFEGEQPIVQ*

Click here to download the sequence:
Link to NCBI Protein BLAST