Transcript Information: S_Transcript_80506.p1


Annotated TAIR IDAT1G12330.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G12900.1); Has 249 Blast hits to 249 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 7; Fungi - 14; Plants - 217; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:4194673-4196627 | Forward length=505
E-Value9E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.97971581913
Replicate 227.839071075526
Replicate 327.555190329632
Condition 2: 8 Hour
Replicate 132.617772197662
Replicate 232.016405435199
Replicate 330.547120189816
Condition 3: 24 Hour
Replicate 127.220100884933
Replicate 228.37437827275
Replicate 325.668891648514


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80506.p1 GENE.S_Transcript_80506~~S_Transcript_80506.p1 ORF type:complete len:508 (+),score=47.02 S_Transcript_80506:401-1924(+)
ATGGCTCCTCCTTCTTCCTCTTCTCCTCTCCCTCCTCACCGCTCTCATCTCTTCACTCCTATACAGGAAGGGAACGAGAGCGAGGAAACAGAGGAACGGCACCGTTTTGGAGGATCAGCCACCGCAACCCCAAGCACCACCAACTACCAGCGGACCCCACTTCACGTGCCACCTGGTACCCGAAAGACCACCACAACTACCAACAACAACAAATCCCGCCGTTCCGATGCTGACGTGGAAAACGACCGAAGTGTCAACTGCACAAACTGCCGACCCACCCCACGTGAGAAAACCTCCGTTGTCGTCGTCCCTGTGGACCCCAAACACCACTCCCACTCTCTCTCCTTCTCCTCCACTCCCGGCAGCACTCACAGCGGCGGTCTCTTCAAGTCCCTTATCTCCGGCATTTCACGGCGGAGCCCCAAACCCTCCCCACTTCCGGAATCCTCCTCATCGTCATCAATAACCGACAGAGAGGAGCAGTGGAGGATCGCCGTCGCCGAGCTGTCTCACAAACTCGTCCAAGCGAATCGCAGAAGAGACGAGGCCATTCTAGAATCTTCCAAATTGAAGTACTCAATGGCTGAGCTGGAGAAGAAGCTCAACCGTCTTGAGGTGTACTGTCACAGCCTCAAGTCCGGACTCGAAATTTGTGGTTACACCAAAACCAACCCTAACAACAGCCCTGCCCGGAATTCCATTCACTTTAAAGTTAACAACCATGACGTCATCATCAACAACTTCCTCATCTCCGTCTCCGATGCCCGGTCCTCGATCCGCTACCTGAGCCGCTCGCTGACGTCACAGCTCAAACTCATGGGGATTAAAGTGTTCGAGAGGTTATCCTCTGCTTTGCGTTCTTACGATATTAAAATATCATCCACCAATAATAATAATCAGAGGACCGTGCAGTTGTACTTGGAGGCATTGCTGAACTCGGCCTTCTTCGAGGACTTCGAGTCAGCCGACTTCTCAAAAACCGGGGTGAACCGGATCCTGAACCCGGCTGAACGGTCCGAGGCCTACTATTCGGATTTCAATGCCCTCAAGGAGTTGGCGTGGGAGGAGGTTCTCGACAAAGGGACTAAGCATTTCAGCGAAGACTTCAGCGGGTTTTGTGATCGTAAGATGAGTGAGATTGTCGCAATGCTTGGATGGAACAGGGCATGGCCTGAGCAGCTCTTGCAAGCCTTCTTTGGGGCTTCTAAGAGCGTTTGGTTGGTCCATCTCTTGGCCAATTCAGTTCACCCGAGCTTGACCATATTCCGGATTGATAAAGGGGCTCGGTTCGATCCGGTTTATATGGAGGATATGGGTGGGGATAAGGCCAAGAAATTGCTCCCCACCGTGGTCCGGATCATGGTCACACCCGGGTTCTATGTCTATGACAATGTGGTCAAGTGCAAGGTCCTTTGCAGGTACTATAATACTAATAGTAGTAGTGGTAGTAGTAACTATAGTGTTTTTAGTAGTGGTAATAATGTTGAGGATCATATTAGGAGAAGTCCTTTGTCACTACCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80506.p1 GENE.S_Transcript_80506~~S_Transcript_80506.p1 ORF type:complete len:508 (+),score=47.02 S_Transcript_80506:401-1924(+)
MAPPSSSSPLPPHRSHLFTPIQEGNESEETEERHRFGGSATATPSTTNYQRTPLHVPPGTRKTTTTTNNNKSRRSDADVENDRSVNCTNCRPTPREKTSVVVVPVDPKHHSHSLSFSSTPGSTHSGGLFKSLISGISRRSPKPSPLPESSSSSSITDREEQWRIAVAELSHKLVQANRRRDEAILESSKLKYSMAELEKKLNRLEVYCHSLKSGLEICGYTKTNPNNSPARNSIHFKVNNHDVIINNFLISVSDARSSIRYLSRSLTSQLKLMGIKVFERLSSALRSYDIKISSTNNNNQRTVQLYLEALLNSAFFEDFESADFSKTGVNRILNPAERSEAYYSDFNALKELAWEEVLDKGTKHFSEDFSGFCDRKMSEIVAMLGWNRAWPEQLLQAFFGASKSVWLVHLLANSVHPSLTIFRIDKGARFDPVYMEDMGGDKAKKLLPTVVRIMVTPGFYVYDNVVKCKVLCRYYNTNSSSGSSNYSVFSSGNNVEDHIRRSPLSLP*

Click here to download the sequence:
Link to NCBI Protein BLAST