Transcript Information: S_Transcript_80513.p1


Annotated TAIR IDAT2G40030.1
Annotated Gene Namenuclear RNA polymerase D1B
Annotated Gene Symbol(s)NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1
Annotation TypeHomolog
Chromosome Positionchr2:16715089-16723406 | Forward length=1976
E-Value3E-49
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61179313184323
Replicate 20.25359528227028
Replicate 30
Condition 2: 8 Hour
Replicate 12.1243683840822
Replicate 21.4571702179132
Replicate 30.98003897034397
Condition 3: 24 Hour
Replicate 10.33478748644589
Replicate 21.1288488524617
Replicate 30.57981711276129


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80513.p1 GENE.S_Transcript_80513~~S_Transcript_80513.p1 ORF type:internal len:261 (+),score=76.18,DUF3223|PF11523.4|1.3e-26 S_Transcript_80513:1-780(+)
GGAAAGGGTGATACTGACAACAGTGTGAAGCAGGATACTTGGGGTAGTTCGCAAGCCTGGGGTTCTGGAAAGGGTGATACTGACAACAACAGTGAGAAGCAGAATACCTGGGATAGTTCGCAAGCCTGGGGTTCTGGAAAGGGTGATACTGACAACAGTGTGAAGCAGGATACTTGGGGTAGTTCGCAAGCCTGGGGTTCTGGGAAGGGTGATACTGACAACAGTGAGAAGCAGGATGCCTGGGGGCAGCCAGGGAACTCAGGTTGGAAGAGAAAGCGACCTGAAGGAGGTCGTGGCTGGGGCTCCTCTAATTCTGGAGAGTGGAAAAGCAGGAAGAACCGCCCTCCTAAACAACCAGGACAAGCAAATGATGATTCTGCTGGTGTGGCATTTACTGCAACCAGAAAACGGATGGATTTGTTCACAACTGAGGAACAGGATGCCCTCTCTGAAATGGAAGCTATCATGCAATCAATCAGGAGGATTATGCATCAACCAGGGTTTAATGATGGTGACCCACTTCCTGATGATGATCAGTCATATATTGTCAACAATGTATTGGATTACCATCCTGATAAAGCAGCTAAAATGGGAGCCGGAATTAAATATATCACTGTGAAAAAGCATAGCAGCTTCCAAGAAAGTCGTTGCTTTTATGTGGTGAAAACTGATGATCAGGCAGAGGACTTCTCTTACATCAAGTGTTTGGAGAACTTGGTAAAAGGGAAATACCCTTCTGTTGCAGAATCTTTTAATTCCAAGTATTTTAGAAGGCAACGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80513.p1 GENE.S_Transcript_80513~~S_Transcript_80513.p1 ORF type:internal len:261 (+),score=76.18,DUF3223|PF11523.4|1.3e-26 S_Transcript_80513:1-780(+)
GKGDTDNSVKQDTWGSSQAWGSGKGDTDNNSEKQNTWDSSQAWGSGKGDTDNSVKQDTWGSSQAWGSGKGDTDNSEKQDAWGQPGNSGWKRKRPEGGRGWGSSNSGEWKSRKNRPPKQPGQANDDSAGVAFTATRKRMDLFTTEEQDALSEMEAIMQSIRRIMHQPGFNDGDPLPDDDQSYIVNNVLDYHPDKAAKMGAGIKYITVKKHSSFQESRCFYVVKTDDQAEDFSYIKCLENLVKGKYPSVAESFNSKYFRRQR

Click here to download the sequence:
Link to NCBI Protein BLAST