Transcript Information: S_Transcript_80517.p1


Annotated TAIR IDAT2G40030.1
Annotated Gene Namenuclear RNA polymerase D1B
Annotated Gene Symbol(s)NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1
Annotation TypeHomolog
Chromosome Positionchr2:16715089-16723406 | Forward length=1976
E-Value1E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9617459929997
Replicate 24.0065598470063
Replicate 33.5724428249105
Condition 2: 8 Hour
Replicate 14.7504501432839
Replicate 26.3377876291719
Replicate 35.1612221803829
Condition 3: 24 Hour
Replicate 12.8562317396903
Replicate 22.524298625937
Replicate 33.2977975735503


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80517.p1 GENE.S_Transcript_80517~~S_Transcript_80517.p1 ORF type:5prime_partial len:413 (+),score=114.20,DUF3223|PF11523.4|2.8e-26 S_Transcript_80517:3-1241(+)
GGACAAGCAAGTGGCACAGCCTGGAAAAACTCCCGACGAACCACTGATACCTGGACTTCAGAGAAGGCCAATGATGAGGCAGGTAACAAAAGTTGGGAGCCTAGAAAGGAAGAGGCTAAACTTCAGTCGTCATGGGGGCAACCTAATGAAACAGCCTGGAAGAATTCCAGTCAAACTGCTGGTGGCTGGAATACAAAAAGCGCTGGTGAACAGTCAGGTTCAGTCTGGGAGTCTAGTAAGGAAGAGGGTAAACCTCAGTCTTCATGGGGGAAACCGAAGGAAACAGCCGGGAATAATTCCAATCAAAGTGCTGGTGGCTGGAATACCAAAAAGGCTAGTGAAGAGGCAGGCTCAGTCTGGGAGTCTAAAAAGGAAAAGGGTCAGACTCAATCTTCCTGGGGACGGACAAGTGAGACAACCGGGAAGAAATCCAATAGTGGCTGGAGTACAGAGAAAGCCAATGATGAGACAGGCTCCAAAAGCTGGGACTCCCAGAAGGAAGAGTGTAAAACTCCATCTTCATGGGGACAAGCAGGTGATTTGGCCTCAAAGGATAGACAAGGTACTGATGAATGGGGTTCTATGAAGTCAAATTCACCTAGTAGTTCGCAAGCCTGGGGTTCTGGGAAGGGTGATACTGACAACAGTGAGAAGCAGGATGCCTGGGGGCAGCCAGGGAACTCAGGTTGGAAGAGAAAGCGACCTGAAGGAGGTCGTGGCTGGGGCTCCTCTAATTCTGGAGAGTGGAAAAGCAGGAAGAACCGCCCTCCTAAACAACCAGGACAAGCAAATGATGATTCTGCTGGTGTGGCATTTACTGCAACCAGAAAACGGATGGATTTGTTCACAACTGAGGAACAGGATGCCCTCTCTGAAATGGAAGCTATCATGCAATCAATCAGGAGGATTATGCATCAACCAGGGTTTAATGATGGTGACCCACTTCCTGATGATGATCAGTCATATATTGTCAACAATGTATTGGATTACCATCCTGATAAAGCAGCTAAAATGGGAGCCGGAATTAAATATATCACTGTGAAAAAGCATAGCAGCTTCCAAGAAAGTCGTTGCTTTTATGTGGTGAAAACTGATGATCAGGCAGAGGACTTCTCTTACATCAAGTGTTTGGAGAACTTGGTAAAAGGGAAATACCCTTCTGTTGCAGAATCTTTTAATTCCAAGTATTTTAGAAGGCAACGTGCCGGTCCGCCTGGAGGAAACCGTCAACAGGAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80517.p1 GENE.S_Transcript_80517~~S_Transcript_80517.p1 ORF type:5prime_partial len:413 (+),score=114.20,DUF3223|PF11523.4|2.8e-26 S_Transcript_80517:3-1241(+)
GQASGTAWKNSRRTTDTWTSEKANDEAGNKSWEPRKEEAKLQSSWGQPNETAWKNSSQTAGGWNTKSAGEQSGSVWESSKEEGKPQSSWGKPKETAGNNSNQSAGGWNTKKASEEAGSVWESKKEKGQTQSSWGRTSETTGKKSNSGWSTEKANDETGSKSWDSQKEECKTPSSWGQAGDLASKDRQGTDEWGSMKSNSPSSSQAWGSGKGDTDNSEKQDAWGQPGNSGWKRKRPEGGRGWGSSNSGEWKSRKNRPPKQPGQANDDSAGVAFTATRKRMDLFTTEEQDALSEMEAIMQSIRRIMHQPGFNDGDPLPDDDQSYIVNNVLDYHPDKAAKMGAGIKYITVKKHSSFQESRCFYVVKTDDQAEDFSYIKCLENLVKGKYPSVAESFNSKYFRRQRAGPPGGNRQQE*

Click here to download the sequence:
Link to NCBI Protein BLAST