Transcript Information: S_Transcript_80522.p1


Annotated TAIR IDAT2G40030.1
Annotated Gene Namenuclear RNA polymerase D1B
Annotated Gene Symbol(s)NRPD1B, DRD3, ATNRPD1B, DMS5, NRPE1
Annotation TypeHomolog
Chromosome Positionchr2:16715089-16723406 | Forward length=1976
E-Value5E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6681345376739
Replicate 24.195385038901
Replicate 34.1671506587106
Condition 2: 8 Hour
Replicate 18.4442820718849
Replicate 26.4563053121359
Replicate 37.725206514557
Condition 3: 24 Hour
Replicate 13.5186389515051
Replicate 23.5491427524481
Replicate 33.2162338503168


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80522.p1 GENE.S_Transcript_80522~~S_Transcript_80522.p1 ORF type:internal len:447 (+),score=125.98,DUF3223|PF11523.4|3.2e-26 S_Transcript_80522:3-1340(+)
GGACAAGCAAGTGGCACAGCCTGGAAAAACTCCCGACGAACCACTGATACCTGGACTTCAGAGAAGGCCAATGATGAGGCAGGTAACAAAAGTTGGGAGCCTAGAAAGGAAGAGGCTAAACTTCAGTCGTCATGGGGGCAACCTAATGAAACAGCCTGGAAGAATTCCAGTCAAACTGCTGGTGGCTGGAATACAAAAAGCGCTGGTGAACAGTCAGGTTCAGTCTGGGAGTCTAGTAAGGAAGAGGGTAAACCTCAGTCTTCATGGGGGAAACCGAAGGAAACAGCCGGGAATAATTCCAATCAAAGTGCTGGTGGCTGGAATACCAAAAAGGCTAGTGAAGAGGCAGGCTCAGTCTGGGAGTCTAAAAAGGAAAAGGGTCAGACTCAATCTTCCTGGGGACGGACAAGTGAGACAACCGGGAAGAAATCCAATAGTGGCTGGAGTACAGAGAAAGCCAATGATGAGACAGGCTCCAAAAGCTGGGACTCCCAGAAGGAAGAGTGTAAAACTCCATCTTCATGGGGACAAGCAGGTGATTTGGCCTCAAAGGATAGACAAGGTACTGATGAATGGGGTTCTATGAAGTCAAATTCACCTAGTAGTTCGCAAGCCTGGGGTTCTGGAAAGGGTGATACTGACAACAGTGTGAAGCAGGATACTTGGGGTAGTTCGCAAGCCTGGGGTTCTGGAAAGGGTGATACTGACAACAACAGTGAGAAGCAGAATACCTGGGGTAGTTCGCAAGCCTGGGGTTCTGGGAAGGGTGATACTGACAACAGTGAGAAGCAGGATGCCTGGGGGCAGCCAGGGAACTCAGGTTGGAAGAGAAAGCGACCTGAAGGAGGTCGTGGCTGGGGCTCCTCTAATTCTGGAGAGTGGAAAAGCAGGAAGAACCGCCCTCCTAAACAACCAGGACAAGCAAATGATGATTCTGCTGGTGTGGCATTTACTGCAACCAGAAAACGGATGGATTTGTTCACAACTGAGGAACAGGATGCCCTCTCTGAAATGGAAGCTATCATGCAATCAATCAGGAGGATTATGCATCAACCAGGGTTTAATGATGGTGACCCACTTCCTGATGATGATCAGTCATATATTGTCAACAATGTATTGGATTACCATCCTGATAAAGCAGCTAAAATGGGAGCCGGAATTAAATATATCACTGTGAAAAAGCATAGCAGCTTCCAAGAAAGTCGTTGCTTTTATGTGGTGAAAACTGATGATCAGGCAGAGGACTTCTCTTACATCAAGTGTTTGGAGAACTTGGTAAAAGGGAAATACCCTTCTGTTGCAGAATCTTTTAATTCCAAGTATTTTAGAAGGCAACGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80522.p1 GENE.S_Transcript_80522~~S_Transcript_80522.p1 ORF type:internal len:447 (+),score=125.98,DUF3223|PF11523.4|3.2e-26 S_Transcript_80522:3-1340(+)
GQASGTAWKNSRRTTDTWTSEKANDEAGNKSWEPRKEEAKLQSSWGQPNETAWKNSSQTAGGWNTKSAGEQSGSVWESSKEEGKPQSSWGKPKETAGNNSNQSAGGWNTKKASEEAGSVWESKKEKGQTQSSWGRTSETTGKKSNSGWSTEKANDETGSKSWDSQKEECKTPSSWGQAGDLASKDRQGTDEWGSMKSNSPSSSQAWGSGKGDTDNSVKQDTWGSSQAWGSGKGDTDNNSEKQNTWGSSQAWGSGKGDTDNSEKQDAWGQPGNSGWKRKRPEGGRGWGSSNSGEWKSRKNRPPKQPGQANDDSAGVAFTATRKRMDLFTTEEQDALSEMEAIMQSIRRIMHQPGFNDGDPLPDDDQSYIVNNVLDYHPDKAAKMGAGIKYITVKKHSSFQESRCFYVVKTDDQAEDFSYIKCLENLVKGKYPSVAESFNSKYFRRQR

Click here to download the sequence:
Link to NCBI Protein BLAST