Transcript Information: S_Transcript_80556.p1


Annotated TAIR IDAT2G27230.1
Annotated Gene Nametranscription factor-related
Annotated Gene Symbol(s)LHW
Annotation TypeOrtholog
Chromosome Positionchr2:11650895-11653840 | Forward length=650
E-Value2.8E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.603548767344
Replicate 219.81248286207
Replicate 315.927817526746
Condition 2: 8 Hour
Replicate 131.420669325354
Replicate 229.911806496131
Replicate 327.838213390984
Condition 3: 24 Hour
Replicate 111.81851789735
Replicate 213.442504648942
Replicate 315.994467183732


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80556.p1 GENE.S_Transcript_80556~~S_Transcript_80556.p1 ORF type:complete len:902 (+),score=179.73,bHLH-MYC_N|PF14215.2|1e-26,bHLH-MYC_N|PF14215.2|8.2e+03 S_Transcript_80556:829-3534(+)
ATGGGATATTTGTTGAAAGAAGCTCTCAAGTCTCTATGCGGTGTCAATCACTGGTCTTATGCCGTTTTCTGGAAAATCGGTTGCCAAAACCCCAAGCTGTTGATATGGGAAGAATGTTATCATGGAATTCTGCCATGCTCAGATGCTTCTTCCACCATGGAAGTTGGGGAGCGAGTTCGTTTGCTTGTGGATAAGATGATGATGACTAACCAAATTAATATGGTTGGAGAAGGGTTGGTTGGTAGGGCTGCATTTACAGGAAATCATCAATGGATTGCGTCCAGCAACTACAATGAAAATGCTCATCCTGCCGAGGTTCTTAATGAGATTCGCCTCCAATTTGCTGCTGGCATGCAAACAATTGCTGTCATTCCGGTCATTCCACATGGTGTTGTGCAGCTTGGTTCACACCTAGCTATCATGGATAATGTTGGATTTGTGCATGAGGTTAAGAGTTTAATTCTTCAAGTGGGATGTGTCCCTGGTGTGCTTATCTCGAACAACTATATTGCAAAAGATGCTTCTTCCATGTATGGGCTTCCAGCTGCTGATGTGACATCTGTCCCCCTCAATCTACATAGAAATCCACTGCACATGAACTCCAGTGCTGTTGGTGCTGACAGTCTCAACCTGCCGAGAAACTCATTTCAGACTCTAAGGCTCGCCAATCAATCATCCAATTCTCTGCTTACACAGTTTCAAGATAACCTGCAAGTTAGTGGTTCAACATTTATGGCGCCTAACCTGACCCAAGATCTAAGCAAGTCTCATGGAGATAATTATGCAGCAAAAATCAGTGCAAATGTGGATTCCAGTGTTTCTGCTCCCAGTGGCCTGGGAGAAACTAAAGTAAATAGAGTAAATAATCTAGGATCTAGAATGAATTTTCCTCAGTCATCTGCAAACTGTAGGAGCTCCATGTTATTAAAGCAGACCATTGTCCCACATGGAGGTTCACCAGAGGGGAATTGTATGATTTCTAGTGCATCAATGCCTCCGGTTGATAGAATTAAAGGACGTCACGCCACTTCAAAAGGAAGTGAGACCAGCCTCATGCTTGAGAATGTCGAATTGGCTGTTGGCTTAGATGGTCGGCGTGGTCACTCTGTGCAAAGCTCTAATAATGACAAGATATTATTTGATGACGTTAATTCTTCTATCAGGGAGTTGGTTGGCTTGATAAATACTGGAGATCAATTTAGTAGCAATAGCATCTTAGGTCTCCGCAATCATGAAAATTGTATTGGGGATAGTGAGCATCCAGCTAAGCATAATCCTGGTAGAGCACATGATACTGATGTGCTTGAAGCCCAGAAATTGCACAAAATGCCAGAGCATATGTCATCTGGAAATTTCATTCCTGGAAATTTTTGTAGTGGAAGTCAGGTACCATCATCAAAGGATCCTGTGTTGGAGGATGTGTTCTTCCAGCCTTCAGCAGGAGATGACTTGTATGATGTCCTGGGGGTGGATTTTAAAAATAAGCTTCTGAATGGTAATGATAGTAAACTTCACAACATGTTCAGTGCCGATATAAAAGATCAGATTAAGGATTTGCCAAGAACTATGAACCTGCAGAATTTGGGTTCTGAGTTCTATTCTGATTATCATGAGGCAATATCAGAAAGTGGTGTCTTTTCTTCATCTGGCTCCGATCACCTGTTGGAGGCTGTGATATCTGGGGTTAGTTCTGCGTCCAGGCAGATCTCGGATGACAACATGTCATGCAAGACAAATCTGTCAAAGATGAGTAGTTCCTCTGTGCCGAGTACTCCTCATAGCAATCCTCCAACATCTGGTCTGGTTAGTATACCTGATCAGATGCAAGCACAGATCTATAGCCTTTCTAAGCCCATGGTGAGATTAGGTGAACCGATTGGCTGTTCAATAAGGTCCACATGTGGCAAGAGTGATGCAGCAAACTGTTCTCTGAAAAGTTCCACATATGGATCACAAATTAGCTCCTGGATTGAACAAGCGCCTAGTGCTAGTGTTTCGACTGCTAATTCGAAGAAAACTGATGAAGTAGGCAAAACCAATCGCAAAAGACTTAAACCTGGAGAAAACCCTAGACCAAGGCCTAAAGATCGGCAAATGATCCAAGATCGTGTGAAGGAGCTCCGCGAAATTGTGCCAAATGGGGCTAAGTGTAGCATCGATGCTTTGCTGGAACGTACAATCAAACATATGCTTTTCCTACAGAGTGTTACTAAGCATGCTGACAAACTGAAACAGACTGTGGAGTCTGAGATCATTAACAGGGAAGGTGGAATGCTTCTAAAGGACAATTTTGAGGGTGGTGCGACGTGGGCCTTCGAGCTTGGTTCCCAATCTATGGTTTGTCCGATAGTGGTTGAGGACTTGAACCCACCGCGTCAAATGCTTATTGAGATGCTCTGCGAAGAACGGGGCTATTTCTTGGAGATAGCTGATATAATTAGAGGAATGGGGCTAACCATCTTAAAAGGAGTAATGGAAGCTCGGAATGATAAAATATGGGCACGTTTTGCTGTTGAGGCAAACAGGGATGTCACGAGGATGGAGGTATTTATTTCACTAGTCCATTTGTTGGAGCAAACTCTAAAGGGTGGCACAGCACCAGCCAATGGCATAAATGATGAGAATATGGCAGCTCATCCAGTGTCCATGACGGCAACACAGCAACTAGTAGGTCCGATAGTATGTGGTGAGCCATTAGCTAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80556.p1 GENE.S_Transcript_80556~~S_Transcript_80556.p1 ORF type:complete len:902 (+),score=179.73,bHLH-MYC_N|PF14215.2|1e-26,bHLH-MYC_N|PF14215.2|8.2e+03 S_Transcript_80556:829-3534(+)
MGYLLKEALKSLCGVNHWSYAVFWKIGCQNPKLLIWEECYHGILPCSDASSTMEVGERVRLLVDKMMMTNQINMVGEGLVGRAAFTGNHQWIASSNYNENAHPAEVLNEIRLQFAAGMQTIAVIPVIPHGVVQLGSHLAIMDNVGFVHEVKSLILQVGCVPGVLISNNYIAKDASSMYGLPAADVTSVPLNLHRNPLHMNSSAVGADSLNLPRNSFQTLRLANQSSNSLLTQFQDNLQVSGSTFMAPNLTQDLSKSHGDNYAAKISANVDSSVSAPSGLGETKVNRVNNLGSRMNFPQSSANCRSSMLLKQTIVPHGGSPEGNCMISSASMPPVDRIKGRHATSKGSETSLMLENVELAVGLDGRRGHSVQSSNNDKILFDDVNSSIRELVGLINTGDQFSSNSILGLRNHENCIGDSEHPAKHNPGRAHDTDVLEAQKLHKMPEHMSSGNFIPGNFCSGSQVPSSKDPVLEDVFFQPSAGDDLYDVLGVDFKNKLLNGNDSKLHNMFSADIKDQIKDLPRTMNLQNLGSEFYSDYHEAISESGVFSSSGSDHLLEAVISGVSSASRQISDDNMSCKTNLSKMSSSSVPSTPHSNPPTSGLVSIPDQMQAQIYSLSKPMVRLGEPIGCSIRSTCGKSDAANCSLKSSTYGSQISSWIEQAPSASVSTANSKKTDEVGKTNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTVESEIINREGGMLLKDNFEGGATWAFELGSQSMVCPIVVEDLNPPRQMLIEMLCEERGYFLEIADIIRGMGLTILKGVMEARNDKIWARFAVEANRDVTRMEVFISLVHLLEQTLKGGTAPANGINDENMAAHPVSMTATQQLVGPIVCGEPLAR*

Click here to download the sequence:
Link to NCBI Protein BLAST