Transcript Information: S_Transcript_80608.p1


Annotated TAIR IDAT3G05500.1
Annotated Gene NameRubber elongation factor protein (REF)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1593540-1594802 | Forward length=246
E-Value3.8E-108
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 168.644646043124
Replicate 277.394864955727
Replicate 375.893322693229
Condition 2: 8 Hour
Replicate 170.238388742938
Replicate 259.569485862129
Replicate 353.966312587215
Condition 3: 24 Hour
Replicate 199.602266391638
Replicate 278.513918675203
Replicate 375.165695826358


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80608.p1 GENE.S_Transcript_80608~~S_Transcript_80608.p1 ORF type:complete len:252 (+),score=77.17,REF|PF05755.8|3.1e-97 S_Transcript_80608:296-1051(+)
ATGGCTGAAGGCGATTCGAAACTCGAACAACAAATGAAGGGAAGCAATGAAGAGCAAAGATTGAAGTACCTTGAATTTGTGCATGCTGCTGCAATCCATGCGATTGTGTGCTTTTCGAACCTGTACTGCTATGCAAAGGATAAGGCTGGGCCTTTGAAGCCTGGTGTTGAGACTGTTGAGGGTACTGTCAAGACTGTTGTCAGTCCTGTTTATGATCGGTTTCATGATGTTCCTCTTGAACTCCTCAAGTTCATCGATCGCAAGGTTGATGAATCTGTGACAAAGTTGGAGCATCGTGTTCCACCAGCAGTGAAGCAGATGTCGTTCCAGGCATATGGTGCTGCTCAGAAGGCACCTGAGGTGGCTCGGAGTGTAGCCTCAGAAGTTCAACGTGCAGGTGTCGTGGATACTGCATCTGGGATAGCAAAGAGTGTTTACACCAAATATGAGCCTACTGCTAAGGAGCTGTACTCAAAGTATGAACCTGTAGCTGAGCAGTACGCTGTGTCAGCTTGGCGTTCACTCAACCGCCTTCCTCTCTTCCCTCAAGTGGCTCAAGTGATGGTCCCAACCGCAGCTTTTGCTTCTGAGAAGTACAATCAAACTGTGAAGCTAGGTTCTGAGAAAGGTTACAGAGTTGCAAACTATTTGCCCCTGGTGCCTACCGAGAGAATCGCTAAGGTTTTTAGTGCTCCTGAAGATGAAGCAAAGCCAGTTGTTCCTACTAGTAATGGTGCTGCTGTTGCAGCTCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80608.p1 GENE.S_Transcript_80608~~S_Transcript_80608.p1 ORF type:complete len:252 (+),score=77.17,REF|PF05755.8|3.1e-97 S_Transcript_80608:296-1051(+)
MAEGDSKLEQQMKGSNEEQRLKYLEFVHAAAIHAIVCFSNLYCYAKDKAGPLKPGVETVEGTVKTVVSPVYDRFHDVPLELLKFIDRKVDESVTKLEHRVPPAVKQMSFQAYGAAQKAPEVARSVASEVQRAGVVDTASGIAKSVYTKYEPTAKELYSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVMVPTAAFASEKYNQTVKLGSEKGYRVANYLPLVPTERIAKVFSAPEDEAKPVVPTSNGAAVAAH*

Click here to download the sequence:
Link to NCBI Protein BLAST