Transcript Information: S_Transcript_80613.p1


Annotated TAIR IDAT3G19910.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6926497-6929324 | Forward length=340
E-Value1.4E-109
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8420755990814
Replicate 27.6770208178186
Replicate 37.804919659204
Condition 2: 8 Hour
Replicate 112.36738936887
Replicate 213.324925522094
Replicate 310.156767510838
Condition 3: 24 Hour
Replicate 17.3957599278501
Replicate 26.4652252459173
Replicate 37.8275310222774


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80613.p1 GENE.S_Transcript_80613~~S_Transcript_80613.p1 ORF type:complete len:319 (-),score=87.97,zf-RING_2|PF13639.2|1.3e-12,zf-C3HC4|PF00097.21|1.8e-08,zf-RING_11|PF17123.1|2.5e-08,zf-RING_11|PF17123.1|9.8e+02,zf-rbx1|PF12678.3|1.8e-07,zf-C3HC4_2|PF13923.2|3.9e-07,zf-RING_5|PF14634.2|4.5e-07 S_Transcript_80613:207-1163(-)
ATGGATGAGAACTCAAAGATCGTGGAAGGAGGAGCTCCCAAGACAACAACAACCGGCGTGGATGAGACACCAAACCCTAACCCTAATGATTCGAATTTGAATGTTTCTAATGACGATGCTCCTATCACTGCATCCAATAATAGTGATTCGAATTCGAATTCATCGAGAACTCCTTTCACCAACCTTAGTCAGGTCGATGCTGACCTCGCTCTTGCTCGCACCTTACAGGAACAGGAAAGGGCCTACATGATGCTGAGCATGAATGGCGGCGCAGCTGGTTATGGAAGGTGGGATACAGGGATATATTTTGACGGTGATGAGGATGAAGATTTTGGTGATTCCCATGACCATGAATATGATGAGGTTGATGATGTCGATGACGACGACGACGATGATATCGGCGATTATGACGACGACGATGAGGGAGATGCATTCGATGTTCATGCTCATAATGAGTCAGGAGAGAACAATGCATTGGCAGTTGATCTCGATCCTACTGCATTCTCTGATGATGAGGCATATGCAAGGGCCTTACAGGATGCTGAAGAGCGAGAAGTGGCTGCAAGATTGTTGGCCATGGCGGGTATAACTGAAAGAGAAATAGTAGATGTTGAGGATCAGGGTGGCAATTCTCAGGATACTTGGGAAGAGGTTGATCCCGATGAACTTTCCTATGAGGAACTGCTTGCTTTGGGTGAAGTAGTTGGTACGGAGAGCAGAGGATTATCTGCTGACATGATTGCATCTTTGCCATCAACAAACTATAAATCCCAAAATACTCCAGAAGCGGAGTGTGACTCGTGTGTCATTTGTCGATTAGAGTATGAGGATGGTGCTGGACTGACAACTCTCCCGTGCAAGCACGCCTACCATTCGGACTGCATAAATAATTGGTTGAAAATAAACAAGGCCTGTCCTGTTTGCAGCAAAGAAGTTTCAACGTCTGGCAACAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80613.p1 GENE.S_Transcript_80613~~S_Transcript_80613.p1 ORF type:complete len:319 (-),score=87.97,zf-RING_2|PF13639.2|1.3e-12,zf-C3HC4|PF00097.21|1.8e-08,zf-RING_11|PF17123.1|2.5e-08,zf-RING_11|PF17123.1|9.8e+02,zf-rbx1|PF12678.3|1.8e-07,zf-C3HC4_2|PF13923.2|3.9e-07,zf-RING_5|PF14634.2|4.5e-07 S_Transcript_80613:207-1163(-)
MDENSKIVEGGAPKTTTTGVDETPNPNPNDSNLNVSNDDAPITASNNSDSNSNSSRTPFTNLSQVDADLALARTLQEQERAYMMLSMNGGAAGYGRWDTGIYFDGDEDEDFGDSHDHEYDEVDDVDDDDDDDIGDYDDDDEGDAFDVHAHNESGENNALAVDLDPTAFSDDEAYARALQDAEEREVAARLLAMAGITEREIVDVEDQGGNSQDTWEEVDPDELSYEELLALGEVVGTESRGLSADMIASLPSTNYKSQNTPEAECDSCVICRLEYEDGAGLTTLPCKHAYHSDCINNWLKINKACPVCSKEVSTSGNS*

Click here to download the sequence:
Link to NCBI Protein BLAST