Transcript Information: S_Transcript_80619.p1


Annotated TAIR IDAT3G02820.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:611573-613294 | Forward length=282
E-Value6.8E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.8219242602857
Replicate 24.0396656936295
Replicate 32.961228047226
Condition 2: 8 Hour
Replicate 14.8057217616074
Replicate 25.4196591070887
Replicate 36.664955166628
Condition 3: 24 Hour
Replicate 11.7845116090908
Replicate 22.4898271872607
Replicate 32.0603923598545


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80619.p1 GENE.S_Transcript_80619~~S_Transcript_80619.p1 ORF type:complete len:355 (+),score=86.63,Swi3|PF07962.8|3.5e-23,zf-CCHC|PF00098.19|2.7e-08 S_Transcript_80619:72-1136(+)
ATGAGCGACGCCGTTCCGACTGGATGTTACAAGTGTGGCCGCCCAGGCCACTGGTCACGTGACTGCCCTTCCTCTTCCAACCCTTCAAACCCTAACCCTAACCCTAATCCTAAACCCTCATCTTTCAACAACACCAACGGCTTCACCCCTTCTACTTCATTCTCAAAGGGCCCAAAACCTGCCGTTCCGAAGCCCAAGAAGGTCCCCAGAACTCGGCCCAAGCTCACTCCGGAGCTTCTTCTTTCCGATGAGGGCCTCGGCTATATTCTCCGTTACTTTCCTCGGAATTTCAAATACCGAGGTCGTGGTCATGAGGTTAGTGATTTGAGGAATCTACTTCGTATGTATGCGGAATGGCACTCCCAATTTCTTCCGTACTTCCCATTTGATCAGTTTATCCACAAGGTGGAAGAAACTGGGTCGTCAAGACGTGTGAGGACTTGCATTGCAGAATTAAAAGACAGAGTTGCTAATGGAGGGGATCCAACAAAGCTGAACGAGTCTGCAGCTGAAAACGAGACTGCGTTTGAAAAAGAAGATGTGTTCAATGCAGAGGAGCCTACTCATCACCAAGAGGATTCGGTTTTCAATGACAATGATAATGCTGAGGACATGCAGGAAGATGTTCTCAATGAAGTATATAACAGCATTGTCGAAGAAACTTCCTATGGTGGTGTGCAAACTAGCGTAGAAGGTGCTGATCTCCCTCCAGCTCCAAGTGACACATCAAGTAAAAAATCAGAGCAAGCACCAAAAACTGGTGGAAGTTCAGATGCCGTTCAGCTTACTGAAGAACAGAAAGCTCTCATGGAAGCCAAGAGACTGAGGGCCCTTACGAAAGCAGCTGCTACATCCCACAGTGTGCAAGCTAGCACTGGAGGTTCTGATATCCCTCCTACTCGAAATGACATGTCAACTAAAATTTCAGATCAAGCACCAAAAAGCACCGTTCGAAGTTCTGATGCTGGCCAGTTAACCGAAGAACAGAAAGCACTCATGGAAGCCAAGAGGCTGAAGGCACTTGAGAAAGCGGCTGCTCGCTCTCGGCTTCTGCCTGCTTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80619.p1 GENE.S_Transcript_80619~~S_Transcript_80619.p1 ORF type:complete len:355 (+),score=86.63,Swi3|PF07962.8|3.5e-23,zf-CCHC|PF00098.19|2.7e-08 S_Transcript_80619:72-1136(+)
MSDAVPTGCYKCGRPGHWSRDCPSSSNPSNPNPNPNPKPSSFNNTNGFTPSTSFSKGPKPAVPKPKKVPRTRPKLTPELLLSDEGLGYILRYFPRNFKYRGRGHEVSDLRNLLRMYAEWHSQFLPYFPFDQFIHKVEETGSSRRVRTCIAELKDRVANGGDPTKLNESAAENETAFEKEDVFNAEEPTHHQEDSVFNDNDNAEDMQEDVLNEVYNSIVEETSYGGVQTSVEGADLPPAPSDTSSKKSEQAPKTGGSSDAVQLTEEQKALMEAKRLRALTKAAATSHSVQASTGGSDIPPTRNDMSTKISDQAPKSTVRSSDAGQLTEEQKALMEAKRLKALEKAAARSRLLPAS*

Click here to download the sequence:
Link to NCBI Protein BLAST