Transcript Information: S_Transcript_80688.p1


Annotated TAIR IDAT5G04000.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, hypocotyl.
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1079305-1079732 | Reverse length=118
E-Value3E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62252634468258
Replicate 20.77413296693034
Replicate 30
Condition 2: 8 Hour
Replicate 11.7459383885372
Replicate 21.831613338925
Replicate 30.37396223868388
Condition 3: 24 Hour
Replicate 10.63873928335071
Replicate 21.1928321882288
Replicate 31.3274760213219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80688.p1 GENE.S_Transcript_80688~~S_Transcript_80688.p1 ORF type:5prime_partial len:171 (+),score=44.55 S_Transcript_80688:1-513(+)
CGCAAAAAGGCAGCAAATTTATCATTTCACTTCCCTGATTTTCCTCTTTCTACCAAAACTCAAAACTCCAACTCCACTTCTCTCGGGTACCTTCAGAGTAACATGGAAGACAAGGGAGCTGTACTGACAACTGCCAGTAATGGAAAAGGGCAGAACAATGAATTAACTGAATCTGATAGGGCCAGAATGGATGTGCCTGCTGCTCTCAAGCAGGCCACAGGCTCTACTGAAGATGACATACAGTTTAAAATGATTGATCCCAAATCGGAAGCACAAAAGGAAGCATCAAAAACTTTTGACCCGTCAGCAGAGGTAAACATGGAGGCTACTATAAATTCTGATGATGTTCTACGAGCTGGAGGTTTTGGTGCAAGAGATGATTTAAGTAGTTTCCTTCCCGCCGCAAGTGACTCCACAGACTTTGAAGCTTCTTTGCTTGATGCACGTGACTATGAAGAGCCCCAGGGCGAACGACGCCGACCAGGTCTAGGCTGGAGTGAAAGTAAAGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80688.p1 GENE.S_Transcript_80688~~S_Transcript_80688.p1 ORF type:5prime_partial len:171 (+),score=44.55 S_Transcript_80688:1-513(+)
RKKAANLSFHFPDFPLSTKTQNSNSTSLGYLQSNMEDKGAVLTTASNGKGQNNELTESDRARMDVPAALKQATGSTEDDIQFKMIDPKSEAQKEASKTFDPSAEVNMEATINSDDVLRAGGFGARDDLSSFLPAASDSTDFEASLLDARDYEEPQGERRRPGLGWSESKE*

Click here to download the sequence:
Link to NCBI Protein BLAST