Transcript Information: S_Transcript_80818.p1


Annotated TAIR IDAT3G43590.1
Annotated Gene Namezinc knuckle (CCHC-type) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:15509753-15512255 | Forward length=551
E-Value3E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6529814431789
Replicate 20.95925171989195
Replicate 31.2600627137864
Condition 2: 8 Hour
Replicate 12.9140284905399
Replicate 20.97268907129246
Replicate 31.5887588277005
Condition 3: 24 Hour
Replicate 11.8995550861386
Replicate 21.1261521280173
Replicate 30.15665866090134


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80818.p1 GENE.S_Transcript_80818~~S_Transcript_80818.p1 ORF type:5prime_partial len:161 (+),score=29.55,zf-CCHC|PF00098.19|2,zf-CCHC|PF00098.19|7.1e-07,zf-CCHC|PF00098.19|0.5,zf-CCHC|PF00098.19|0.21,zf-CCHC|PF00098.19|0.0038,zf-CCHC|PF00098.19|6.3e-06 S_Transcript_80818:3-485(+)
CATGCAGTCAACTCTACTGCAACAAAGCAGAGGAAACCTTGCTATGTTTGTGGGGATATACAGCACACAGGGAAGAAATGCCGCAAGCGTCGAACATGCTACACATGCAAGGAAAGAGGCCATATTGCTGAAGATTGTCCAAAAGGCAACCTAGAATTTGATATCTGTTTGAGATGTGGGGAGTCAGGTCACAGCCTGTTCTCTTGCGATAATGACTACTCCCCTGATGATCTCAAGCATATACAATGTTATGATTGCAAAGAACTCGGGCATATCTGCTGTGGTAGCTACATTGATGTGAACCCAGCAACACCATCTTGTTACAACTGTGGAGAGTATGGGCATGCAGGCTTGCAATGCATGAAGCTGCTTTTAGATAGGTGCAGCTCACAACCCCCTTCAATATGCTACAAATGTGGAGAGGAAGGCCATGTTGCACGAAGATGCATCAACAATCAAAAGGTTTTGATTTTTGTTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80818.p1 GENE.S_Transcript_80818~~S_Transcript_80818.p1 ORF type:5prime_partial len:161 (+),score=29.55,zf-CCHC|PF00098.19|2,zf-CCHC|PF00098.19|7.1e-07,zf-CCHC|PF00098.19|0.5,zf-CCHC|PF00098.19|0.21,zf-CCHC|PF00098.19|0.0038,zf-CCHC|PF00098.19|6.3e-06 S_Transcript_80818:3-485(+)
HAVNSTATKQRKPCYVCGDIQHTGKKCRKRRTCYTCKERGHIAEDCPKGNLEFDICLRCGESGHSLFSCDNDYSPDDLKHIQCYDCKELGHICCGSYIDVNPATPSCYNCGEYGHAGLQCMKLLLDRCSSQPPSICYKCGEEGHVARRCINNQKVLIFVH*

Click here to download the sequence:
Link to NCBI Protein BLAST