Transcript Information: S_Transcript_80827.p1


Annotated TAIR IDAT1G72520.1
Annotated Gene NamePLAT/LH2 domain-containing lipoxygenase family protein
Annotated Gene Symbol(s)LOX4
Annotation TypeOrtholog
Chromosome Positionchr1:27308611-27312589 | Forward length=926
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.6057787618078
Replicate 222.326297358962
Replicate 36.5680971068632
Condition 2: 8 Hour
Replicate 18.9376771578864
Replicate 27.94309935417
Replicate 39.0725431717185
Condition 3: 24 Hour
Replicate 16.2617255608218
Replicate 27.8252899905304
Replicate 36.5999052134994


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80827.p1 GENE.S_Transcript_80827~~S_Transcript_80827.p1 ORF type:complete len:921 (+),score=179.89,Lipoxygenase|PF00305.15|2.3e-301,PLAT|PF01477.19|1e-07 S_Transcript_80827:275-3037(+)
ATGGCAGCAGGGGTAAAAGAACTGATGGGAGCTTCAATTCTTGAAAGATCTTCTCTTATTTCATCCTCACAATTCATCAGTTTTTGCAATAATCACAAGAGAAAAAGTGCTAGTTATTTCCCAGTTTCTAAAGAGAGAAGATCTTTCAAGGTGTTCAAACCAGTGGCTGCTATCAGTGAAGATTTCAGGATCAGAACTTCTTCTGATTTGGTGATTAATCATAATAATAATAATAAAAATAATTCTTCTTCTGCCAAAGTCAAGGTTAGAGCTGTTGTTACTGTTAGAAACAAGATTAAGGAGGATTTGAAAGAGACTTTTGTTAGGAATTTGGATAATATCACTGATAAAGTTGGAAGAAATGTTGTTCTTCAACTTGTCAGCACTGAAATTGATTCAAGAGCAAGAGGACCCAAGAAGAGTGGTGAAGCAGTGTTGAAAGATTGGGCAAAGAAGTCAAATATGAAGGCCGAAAGAGTAAATTACATGGCAGAATTTGTGGTAGATTCTAATTTTGGGGTGCCAGGTGCTATTTTGGTTACCAACAAGCACCAGCAGGAGTTTTTCTTAGAGACCATTACCATTGAAGGCTTAGCTTGTGGCCCTGTTCATTTCCCCTGCAACTCTTTTGTTCAATCTTCCAAAGATCTTCCTGGCAAAAGGATTTTCTTCCACAATAAGCCTTATTTGCCGGATGAGACGCCTGCTGGACTAAGAGCTTTAAGGGAGAGGGAGCTGAAAGACATAAGGGGTGATGGAAAAGCGGAAAGGAAATTATCGGACAGGATATATGACTATGATGTCTACAATGATTTAGGCAATCCTGATAAGGGAATTGATTTGGCTCGTCCTGTTCTTGGTGGTGAAAAGATTCCTTACCCCAGGCGGTGTCGGACTGGCCGACCAGCGAGTGAAACTGATATCACTGTCGAGAGTAGGGTGGAGAAGCCACTTCCGATATATGTGCCAAGAGATGAGCAATTTGAGGAGACAAAGGCAGGGACATTCTCTTTCTGCAGGCTTAAGGCAGTTCTTCATAATCTGTTACCTTCGTTAACCACAAACATCTCTTCGAAGCATGATTTCACCGGGTTTAAGCACCTTGACAGTCTTTTCAGTGAAGGATTGCTCCTTAAACTTAATTTGAATGATGAACTTCTTAAGAAACTGCCTGAGGTGGTTAACAAGTTCAAAACAACAAGTACTCAAGGATTGCTCAAATTTGATACGCCTAAAATAATTGCTAAGGACAAATTGGCTTGGATCCGTGATGATGAATTTGCCCGACAATTTTTAGCCGGTGTTAACCCTGCAAGCATTGAGAAAATGCAGTCATTTCCACCAGTTAGCAAGCTCAATCCAGAAACTTATGGCCCTGTAGAATCTGCACTTACGGAAGAGCACATTTTGGGGCACCTTGATGGGATATCAGTTCAAGAGGCTTTGGATGCCAATAGGCTATACATGGTAGATTATCATGATCTTTACCTCCCCTTCCTGGAGCGCATAAACGCTTTGGATGGCAGGAAATCATACGCGACTAGAACTATTCTTTTCTTGACCAAACTTGGCACTCTTAAGCCAATTGCCATTGAGCTCAGCCTGCCCCCTGCTGGACCCAATTCCAAGTCAAAGAGGGTGGTGAGTCCTCCAGTGGATGCCACCTCTAACTGGATTTGGCAGCTCGCCAAGGCCCATGTCTGCGCCAATGATGCAGGCGCACACCAACTTGTTCATCACTGGTTGAGGACTCATGCAACATTGGAACCATTCATCCTGGCAGCACACAGGCAAATGAGCTCTATGCATCCTATTTACAAGCTCATGGAGCCACACATGCGATACACCTTGCACATTAACGCCCTAGCTCGGCAGAACTTGATTAATGCGGATGGAGTTATCGAGTCATGTTTCACCCCTGGTCGCTATAGCATGGAGATGAGTGCGGCAGCTTACAAGGGTTGGCGCTTTGACTTGGAGGGCCTCCCCTCTGATCTTGTTCGAAGAGGCATAGCAGTACCAGACAGCACACAACCACATGGGCTGAGGCTTTTGCTAAAAGATTATCCTTATGCTGCTGATGGGCTTCTTATATGGGACGCCATTGAAAATTGGGTCCAGTCCTATGTCAGCCATTACTACAAAGACTCCAACCTTGTTGCTGACGATAGAGAGCTCCAAGCTTGGTATTTCGAGGCAGTGAAAGTAGGTCACGCTGATATGAGTGACGCGCCCTGGTGGCCTGAGCTGAACACTTCAGAAGACCTTGTCAAGATCCTTACTATTCTCATCTGGCTGGCTTCAGCCCAGCATGCTGCCCTGAACTTTGGGCAGTACCCCTATGGAGGTTACATGCCAAACAGGCCTGTTCTAATGCGTCGTTTGATCCCTGACGAAAACGATCCCGAGTATGCAAGCTTCCTTGCTGACCCACAAAAGTTCTACTTCTCTGCACTGCCTAGTGTTCTGCAAACAAGCAAGTTCATTGCTGTGATCGACACACTGTCCACACATTCCCCTGATGAGGAGTACCTTGGAGAACGGGCACAGCCGTCAACATGGACCGGGGATCCTGTGATCGTCGAGAAGTTCTTTGAGTTCTCGTTGGAGATTCAGCGGATAGAGAGGGAGATTGATAGAAGGAACTCGGATCCTAGCCTTCGGAACAGGTGTGGTGCTGGGGTGATTCCTTATGAGCTTATGGCTCCTAGTTCCGGAGCTGGTGCTACTTGTAGAGGAGTGCCTAATAGTATAACCATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80827.p1 GENE.S_Transcript_80827~~S_Transcript_80827.p1 ORF type:complete len:921 (+),score=179.89,Lipoxygenase|PF00305.15|2.3e-301,PLAT|PF01477.19|1e-07 S_Transcript_80827:275-3037(+)
MAAGVKELMGASILERSSLISSSQFISFCNNHKRKSASYFPVSKERRSFKVFKPVAAISEDFRIRTSSDLVINHNNNNKNNSSSAKVKVRAVVTVRNKIKEDLKETFVRNLDNITDKVGRNVVLQLVSTEIDSRARGPKKSGEAVLKDWAKKSNMKAERVNYMAEFVVDSNFGVPGAILVTNKHQQEFFLETITIEGLACGPVHFPCNSFVQSSKDLPGKRIFFHNKPYLPDETPAGLRALRERELKDIRGDGKAERKLSDRIYDYDVYNDLGNPDKGIDLARPVLGGEKIPYPRRCRTGRPASETDITVESRVEKPLPIYVPRDEQFEETKAGTFSFCRLKAVLHNLLPSLTTNISSKHDFTGFKHLDSLFSEGLLLKLNLNDELLKKLPEVVNKFKTTSTQGLLKFDTPKIIAKDKLAWIRDDEFARQFLAGVNPASIEKMQSFPPVSKLNPETYGPVESALTEEHILGHLDGISVQEALDANRLYMVDYHDLYLPFLERINALDGRKSYATRTILFLTKLGTLKPIAIELSLPPAGPNSKSKRVVSPPVDATSNWIWQLAKAHVCANDAGAHQLVHHWLRTHATLEPFILAAHRQMSSMHPIYKLMEPHMRYTLHINALARQNLINADGVIESCFTPGRYSMEMSAAAYKGWRFDLEGLPSDLVRRGIAVPDSTQPHGLRLLLKDYPYAADGLLIWDAIENWVQSYVSHYYKDSNLVADDRELQAWYFEAVKVGHADMSDAPWWPELNTSEDLVKILTILIWLASAQHAALNFGQYPYGGYMPNRPVLMRRLIPDENDPEYASFLADPQKFYFSALPSVLQTSKFIAVIDTLSTHSPDEEYLGERAQPSTWTGDPVIVEKFFEFSLEIQRIEREIDRRNSDPSLRNRCGAGVIPYELMAPSSGAGATCRGVPNSITI*

Click here to download the sequence:
Link to NCBI Protein BLAST