Transcript Information: S_Transcript_80942.p1


Annotated TAIR IDAT3G47833.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17648721-17649829 | Forward length=93
E-Value3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.7373928900321
Replicate 23.6963835907878
Replicate 32.8967648298849
Condition 2: 8 Hour
Replicate 18.9321006563908
Replicate 25.8565048795096
Replicate 37.030881670753
Condition 3: 24 Hour
Replicate 17.2053804183635
Replicate 24.1530544773411
Replicate 36.4705768369146


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80942.p1 GENE.S_Transcript_80942~~S_Transcript_80942.p1 ORF type:5prime_partial len:191 (+),score=5.75 S_Transcript_80942:1-573(+)
CTCTTTTGGCCCGAAAAAATAAAAAAAAAAAAAAGGGGAAGAAAAACTCGAAAAAAACATTCTGCAGTCTTCTCCTCTCTCCAGTCCGGTCCGGTTTGGAGTTTCCACCAAACTGCCCCCAATCATTCACCTCACAAATCACCGATTCACCATTGTGCTTGGCACACGCACTTACTTACAGTCAGACTCACTCCCTTTTTCTTTCCCCTGCCCCGATTTTCACCTCTCTTTCTGTCCTTGTCTGTCTGTGTTTCGATCGCAAGACCCAATCTAATGGCATCATTTCTCAGTGGCAAAACCTCCCTCTTCTCCCAGCTTCGATCTAATCCTCAGAGAACGCAAAACGTTTTAGCCCAACAGACGCGAGGGTTTCACGTCGACCTTGGAGAGCGCGAGAAATCTCTGTTGGCGAAGGAACCTGCACTGAGTCGGTTCAAGTCATATAAGAGTGGTGTGAAGCGAATTAAAAGATTTGGCGATGTTCTCACAATTATTGTTGTGGCTGGCTGCTGCTATGAAATCTATGTCAGGGCGACAATGCGAGAGGAATTGAGGAAGCAAGAAAAGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80942.p1 GENE.S_Transcript_80942~~S_Transcript_80942.p1 ORF type:5prime_partial len:191 (+),score=5.75 S_Transcript_80942:1-573(+)
LFWPEKIKKKKRGRKTRKKHSAVFSSLQSGPVWSFHQTAPNHSPHKSPIHHCAWHTHLLTVRLTPFFFPLPRFSPLFLSLSVCVSIARPNLMASFLSGKTSLFSQLRSNPQRTQNVLAQQTRGFHVDLGEREKSLLAKEPALSRFKSYKSGVKRIKRFGDVLTIIVVAGCCYEIYVRATMREELRKQEKS*

Click here to download the sequence:
Link to NCBI Protein BLAST