Transcript Information: S_Transcript_80943.p1


Annotated TAIR IDAT3G47833.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62575.2); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17648721-17649829 | Forward length=93
E-Value4.7E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3265398924562
Replicate 20.406063611488
Replicate 30.33943686043437
Condition 2: 8 Hour
Replicate 10.26166123088507
Replicate 20.82350363091018
Replicate 30.26154414239241
Condition 3: 24 Hour
Replicate 10.53607076050538
Replicate 20.83425073287168
Replicate 30.61894587497217


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80943.p1 GENE.S_Transcript_80943~~S_Transcript_80943.p1 ORF type:5prime_partial len:163 (+),score=10.17 S_Transcript_80943:1-489(+)
TGGAGTTTCCACCAAACTGCCCCCAATCATTCACCTCACAAATCACCGATTCACCATTGTGCTTGGCACACGCACTTACAGTCCCTTTTCTTTCCCCTACCCCGATTTTCACCTCTTTCTCTCTCTCCTTGTCTGTCTCTGTGTGTTTCGATCTCAAGACCCAGACTGAAAGTCGCAAAACCTAATCTAATGGCATCATTTCTCAGTGGCAAAACCTCCCTCTTCTCCCAGCTTCGATCTAATCCTCAGAGAACGCAAAACGTTTTAGCCCAACAGACGCGAGGGTTTCACGTCGACCTTGGAGAGCGCGAGAAAGCTCTGTTGGCAAAGGACCCTGCACTGAGTCGGTTCAAGTCATATAAGAGTGGTGTGAAGCGAATTAAAAGATTTGGCGATGTTCTCACAATTATTGTTGTGGCTGGCTGCTGCTATGAAATCTATGTCAGGGCGACAATGCGAGAGGAATTGAGGAAGCAAGAAAAGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80943.p1 GENE.S_Transcript_80943~~S_Transcript_80943.p1 ORF type:5prime_partial len:163 (+),score=10.17 S_Transcript_80943:1-489(+)
WSFHQTAPNHSPHKSPIHHCAWHTHLQSLFFPLPRFSPLSLSPCLSLCVSISRPRLKVAKPNLMASFLSGKTSLFSQLRSNPQRTQNVLAQQTRGFHVDLGEREKALLAKDPALSRFKSYKSGVKRIKRFGDVLTIIVVAGCCYEIYVRATMREELRKQEKS*

Click here to download the sequence:
Link to NCBI Protein BLAST