Transcript Information: S_Transcript_80946.p1


Annotated TAIR IDAT5G62575.2
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G47833.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:25117542-25118565 | Forward length=100
E-Value8.2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.31682144327596
Replicate 20.78795676991124
Replicate 30.65866914584288
Condition 2: 8 Hour
Replicate 10.76162108275475
Replicate 20.53266306285063
Replicate 30.50752018107098
Condition 3: 24 Hour
Replicate 10
Replicate 20.2698072806708
Replicate 30.60052486678848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80946.p1 GENE.S_Transcript_80946~~S_Transcript_80946.p1 ORF type:5prime_partial len:84 (+),score=12.97 S_Transcript_80946:3-254(+)
CAAGAAAGAAAAAACATCATGCTTTCTCTCTCTTCTCTCCGGCAGCCAGCGACAGTTCCCCTACCTCCGCCGAACCGGGTGCTGTTGGCGAAGGAACCTGCACTGAGTCGGTTCAAGTCATATAAGAGTGGTGTGAAGCGAATTAAAAGATTTGGCGATGTTCTCACAATTATTGTTGTGGCTGGCTGCTGCTATGAAATCTATGTCAGGGCGACAATGCGAGAGGAATTGAGGAAGCAAGAAAAGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80946.p1 GENE.S_Transcript_80946~~S_Transcript_80946.p1 ORF type:5prime_partial len:84 (+),score=12.97 S_Transcript_80946:3-254(+)
QERKNIMLSLSSLRQPATVPLPPPNRVLLAKEPALSRFKSYKSGVKRIKRFGDVLTIIVVAGCCYEIYVRATMREELRKQEKS*

Click here to download the sequence:
Link to NCBI Protein BLAST