Transcript Information: S_Transcript_80981.p1


Annotated TAIR IDAT5G16530.1
Annotated Gene NameAuxin efflux carrier family protein
Annotated Gene Symbol(s)PIN5
Annotation TypeOrtholog
Chromosome Positionchr5:5400735-5402626 | Forward length=351
E-Value2.8E-143
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54630794324417
Replicate 22.2645091921203
Replicate 30.75717978055838
Condition 2: 8 Hour
Replicate 10.56284021364867
Replicate 20.59045934826258
Replicate 30
Condition 3: 24 Hour
Replicate 11.8577760153291
Replicate 20
Replicate 30.81361433564891


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80981.p1 GENE.S_Transcript_80981~~S_Transcript_80981.p1 ORF type:complete len:341 (+),score=42.51,Mem_trans|PF03547.14|1.6e-78 S_Transcript_80981:610-1632(+)
ATGATAAGTCTAGAAGATATATACAAGGTTATAGTAGCCATGTTTCCACTCTACGTAGCCCTAATTTTAGGATATTGTTCAGTAAAACGGTGGCGTTTATTCACTCCAGATCATTGTGATGCCATAAATAGGCTTGTTTGTTACTTCACACTACCTCTCTTTAACTTTGAGTTTACAGCTCATAGTGATCCTTTCAAATGGAACTACAAATTCCTAGCAGCAGATGCAATTTCTAAGGTTATTATAATTGGGGTTCTTGTTCTTTGGGCTAAGTATAGTAGTAAAGGTAGTTATGGTTGGTCCATAACTACATTTTCTTTGTCAACCCTAACAAACTCTCTAGTTGTAGGAGTTCCTTTACTTAGAGCTATGTATGGGACTCAAGCTGTTGATCTTGTTGTTCAATTCTCCATTATTCAAGCTATAGTTTGGCTCACTATTCTCTTGTTTGTGCTTGAACTTCGCCAATCGAGAATCGATTTTTCCACCATCAATGTTGTTGCAGATCAAAAGGATGATGATGATGTTGAAGGGAAAAATGGTCATCAAGAAGTTGATGATAGTGCTAATATAAAGAAGCCATCCTTGTGGTCTTTGATGAAGGTGGTTGCTTTAAAGTTGGCTCATAATCCTAACTCTTATTCTTGCCTTGTGGGAATTGCTTGGGCCTCTTTGTCATGCAGGTTTCACATTCAAATGCCAAGCATCATCGATGGATCTGTGCTTATCATGTCAAAAGCTGGGACGGGTACAGCAATGTTTAGCATGGGTATGTTCATGGCGTTGCAAGAGAAGCTAATCGCCTGTGGACCTAGCCTTACCATATTTGGGATGATATTGAAGTTCATTGCTGGACCAACTGCCATGGCTATAGGTTCTATTGCTGTTGGTCTGCGCGGTGATGTACTACGTGTAGCCATCATCCAGGTACGTACTGTGTTTTCCTCAACAGTCAATATATACTACTTCAGTCCCAAACTATTCTTAATGGTTCAATTTTGGGATAGATGGAGTAATTCGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80981.p1 GENE.S_Transcript_80981~~S_Transcript_80981.p1 ORF type:complete len:341 (+),score=42.51,Mem_trans|PF03547.14|1.6e-78 S_Transcript_80981:610-1632(+)
MISLEDIYKVIVAMFPLYVALILGYCSVKRWRLFTPDHCDAINRLVCYFTLPLFNFEFTAHSDPFKWNYKFLAADAISKVIIIGVLVLWAKYSSKGSYGWSITTFSLSTLTNSLVVGVPLLRAMYGTQAVDLVVQFSIIQAIVWLTILLFVLELRQSRIDFSTINVVADQKDDDDVEGKNGHQEVDDSANIKKPSLWSLMKVVALKLAHNPNSYSCLVGIAWASLSCRFHIQMPSIIDGSVLIMSKAGTGTAMFSMGMFMALQEKLIACGPSLTIFGMILKFIAGPTAMAIGSIAVGLRGDVLRVAIIQVRTVFSSTVNIYYFSPKLFLMVQFWDRWSNS*

Click here to download the sequence:
Link to NCBI Protein BLAST