Transcript Information: S_Transcript_80995.p1


Annotated TAIR IDAT4G21350.1
Annotated Gene Nameplant U-box 8
Annotated Gene Symbol(s)B80, PUB8
Annotation TypeHomolog
Chromosome Positionchr4:11356143-11357267 | Reverse length=374
E-Value1E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4112155338477
Replicate 28.5644583936344
Replicate 37.7039277311243
Condition 2: 8 Hour
Replicate 12.6094359459783
Replicate 21.6991277447894
Replicate 31.3491042787963
Condition 3: 24 Hour
Replicate 16.9129378134792
Replicate 24.8770227442773
Replicate 35.6403727994563


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_80995.p1 GENE.S_Transcript_80995~~S_Transcript_80995.p1 ORF type:3prime_partial len:237 (+),score=-1.64,U-box|PF04564.11|3.5e-21,zf-Nse|PF11789.4|1.3e-06,zf-RING_UBOX|PF13445.2|1.9e-06 S_Transcript_80995:89-709(+)
ATGGGGAGTGAGTTGCCGGAATACTTCAAGTGCCCGATATCTCTAGAAATAATGTCGGACCCGGTAATTCTCTCGTCGGGTCACACCTTTGATCGGAGCTCCATCCAAAAATGGATCGACTCCGGTCACCGTACTTGTCCAATTACCAAACTACCCCTCCCTGACCCTCCCCCTCTTATCCCTAACCACGCCCTCCGTAGCCTCATTTCCAATTATACCCCTCACCACCACCTTCATTCAGCTCAATCCGACTCGCCTCCCAACCCACTGAGTCACCTCGGATCTTTAATCTCCACTCTCACATCCTCTAAATCCTCCCCTGCCTCGAAGCTCGACTCGCTGACTCAACTCACCGCTTTGTCAAAATCCAACCCGGGTCTCCGTGCCAGACTCACTGAGTCGGGCGCCGTCTCGGCCGTGTTGCGCTGTGTTGACTCGGACGATTCAGCCCTCCAGGAAACTTCGCTATCTTTACTGCTGACACTGAGTTTGGACTCCGATGACAACAAGGTAGGGCTGGTGGCGGAGGGGGCGGTGGGGAAGCTGGTGGTAGCCGCGCTGCCAACACGCGGCAATGCGGCTGCCCTGGCGGCGACGGTTCTTACAAGCCTCGCCGTCGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_80995.p1 GENE.S_Transcript_80995~~S_Transcript_80995.p1 ORF type:3prime_partial len:237 (+),score=-1.64,U-box|PF04564.11|3.5e-21,zf-Nse|PF11789.4|1.3e-06,zf-RING_UBOX|PF13445.2|1.9e-06 S_Transcript_80995:89-709(+)
MGSELPEYFKCPISLEIMSDPVILSSGHTFDRSSIQKWIDSGHRTCPITKLPLPDPPPLIPNHALRSLISNYTPHHHLHSAQSDSPPNPLSHLGSLISTLTSSKSSPASKLDSLTQLTALSKSNPGLRARLTESGAVSAVLRCVDSDDSALQETSLSLLLTLSLDSDDNKVGLVAEGAVGKLVVAALPTRGNAAALAATVLTSLAVV

Click here to download the sequence:
Link to NCBI Protein BLAST