Transcript Information: S_Transcript_81023.p1


Annotated TAIR IDAT5G02640.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:594334-594819 | Reverse length=161
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.492278463282
Replicate 221.635767824144
Replicate 314.159261896442
Condition 2: 8 Hour
Replicate 13.9899117367539
Replicate 23.897031698533
Replicate 33.1629967413843
Condition 3: 24 Hour
Replicate 130.864706351227
Replicate 228.512537144437
Replicate 326.849273076414


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81023.p1 GENE.S_Transcript_81023~~S_Transcript_81023.p1 ORF type:5prime_partial len:155 (+),score=33.54 S_Transcript_81023:3-467(+)
CCTCCCAAACAAGCAAAAATAATAACCAAGAAGAAGAAGAAAAAAAGACACAACATGTCTTCGACCTTCATATCATCCACCAATGAACCAACTAAGGTCCCAAATGCTCGACCAAACTACTATGAGAGCCCCTATAAGTGGCCGGAATCCGAGGCTCGGTTTTCGAGACCGATCAAGACGGCTAGAGTTGGTGGTGAAGTGAAGGTGGTGGATAGCAAATCATGCAGGCAGTTGTATGTGAGAAGTGCATATACCTTCTCAAGGGCAAAAGAGAATAAGGATATTGATGTAAAAGAGAAGGCTAAGAAGTGCTTAGACAGGGTTAAAAGTAAAGTTATGAGGAATGATAGTTACAAAGGTGTGGTAATTGTGAGCAAGGTCAAGCATTTCTCTTGTAATTCTCTCTTGTCTATGCTTCGTAGGATGCTTGCTTGTACTGCCAAGGTTGATGTTGCTGCCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81023.p1 GENE.S_Transcript_81023~~S_Transcript_81023.p1 ORF type:5prime_partial len:155 (+),score=33.54 S_Transcript_81023:3-467(+)
PPKQAKIITKKKKKKRHNMSSTFISSTNEPTKVPNARPNYYESPYKWPESEARFSRPIKTARVGGEVKVVDSKSCRQLYVRSAYTFSRAKENKDIDVKEKAKKCLDRVKSKVMRNDSYKGVVIVSKVKHFSCNSLLSMLRRMLACTAKVDVAAH*

Click here to download the sequence:
Link to NCBI Protein BLAST