Transcript Information: S_Transcript_81025.p1


Annotated TAIR IDAT5G02640.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:594334-594819 | Reverse length=161
E-Value1E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8086051528374
Replicate 211.229563547238
Replicate 39.0557147236841
Condition 2: 8 Hour
Replicate 11.2769694800678
Replicate 20.53585266202938
Replicate 31.0211184481428
Condition 3: 24 Hour
Replicate 112.42673012938
Replicate 28.0069753473323
Replicate 310.874174833344


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81025.p1 GENE.S_Transcript_81025~~S_Transcript_81025.p1 ORF type:5prime_partial len:167 (+),score=31.13 S_Transcript_81025:2-502(+)
TCAACCCCACCAAGATTACACACCTCTCTTTTAATTCCCTTCCAAACAAGCAAAAATACTAACCAAGAAGAAGAGAAAAAAAGACACAACATGTCGTCGACCTTCATATCATCCACCAATGAACCAACTAAGGTCCCAATCGCTCGACCAAACTACTGTGAGAGCCCCTACAAGTGGCCGGAATCCGAGGATCGGTTTTCGAGACCGATCAAGACGGCTAGAGTTGGTGGTGAAGTGAAGGTGGTGGATAGCAAATCATGCAGGCAGTTGTATGTGAGAAGTGCATATACCTTCTCAAGGGCAAAAGAGAATAAGGATATTGATGTAAAAGAGAAGGCTAAGAAGTGCTTAGACAGGGTTAAAAGTAAAGTTATGAGGAATGATAGTTACAAAGGTGTGGTAATTGTGAGCAAGGTCAAGCATTTCTCTTGTAATTCTCTCTTGTCTATGCTTCGTAGGATGCTTGCTTGTACTGCCAAGGTTGATGTTGCTGCCCACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81025.p1 GENE.S_Transcript_81025~~S_Transcript_81025.p1 ORF type:5prime_partial len:167 (+),score=31.13 S_Transcript_81025:2-502(+)
STPPRLHTSLLIPFQTSKNTNQEEEKKRHNMSSTFISSTNEPTKVPIARPNYCESPYKWPESEDRFSRPIKTARVGGEVKVVDSKSCRQLYVRSAYTFSRAKENKDIDVKEKAKKCLDRVKSKVMRNDSYKGVVIVSKVKHFSCNSLLSMLRRMLACTAKVDVAAH*

Click here to download the sequence:
Link to NCBI Protein BLAST