Transcript Information: S_Transcript_81049.p1


Annotated TAIR IDAT5G08290.1
Annotated Gene NamemRNA splicing factor, thioredoxin-like U5 snRNP
Annotated Gene Symbol(s)YLS8
Annotation TypeOrtholog
Chromosome Positionchr5:2666043-2666936 | Forward length=142
E-Value1.8E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1220.34820603114
Replicate 2212.60506300878
Replicate 3199.00099144752
Condition 2: 8 Hour
Replicate 1258.73812727431
Replicate 2254.53844571213
Replicate 3232.8346430698
Condition 3: 24 Hour
Replicate 1202.86716975881
Replicate 2192.40466610969
Replicate 3206.53855942931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81049.p1 GENE.S_Transcript_81049~~S_Transcript_81049.p1 ORF type:complete len:143 (+),score=19.96,DIM1|PF02966.12|2.9e-66 S_Transcript_81049:340-768(+)
ATGTCGTACCTGCTACCTCACCTTCACTCAGGATGGGCAGTGGATCAGGCCATTCTCGCCGAAGAAGAACGTCTCGTCATCATTCGCTTTGGTCATGATTGGGACGAAACTTGCATGCAGATGGATGAAGTATTGGCTTCAGTAGCAGAAACAACAAAGAATTTCGCTGTGATATACCTTGTAGACATAACTGAGGTGCCTGATTTCAACACGATGTACGAGCTCTATGACCCATCCACAGTTATGTTCTTTTTCAGGAACAAGCATATAATGATAGACCTTGGTACTGGGAACAACAATAAGATCAATTGGGCCCTCAAGGACAAGCAGGAGTTCATTGACATTGTTGAGACTGTTTATCGTGGAGCAAGGAAGGGTCGAGGTCTTGTGATTGCACCAAAAGATTACTCCACTAAGTACCGCTATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81049.p1 GENE.S_Transcript_81049~~S_Transcript_81049.p1 ORF type:complete len:143 (+),score=19.96,DIM1|PF02966.12|2.9e-66 S_Transcript_81049:340-768(+)
MSYLLPHLHSGWAVDQAILAEEERLVIIRFGHDWDETCMQMDEVLASVAETTKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVYRGARKGRGLVIAPKDYSTKYRY*

Click here to download the sequence:
Link to NCBI Protein BLAST