Transcript Information: S_Transcript_81053.p1


Annotated TAIR IDAT1G52640.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:19608857-19610428 | Reverse length=523
E-Value1E-52
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5687516753818
Replicate 29.7346890892612
Replicate 39.2056587265672
Condition 2: 8 Hour
Replicate 113.768863594878
Replicate 216.045227048254
Replicate 314.343713465021
Condition 3: 24 Hour
Replicate 19.787400950641
Replicate 211.621477486338
Replicate 311.859087318249


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81053.p1 GENE.S_Transcript_81053~~S_Transcript_81053.p1 ORF type:complete len:587 (+),score=109.92,PPR_2|PF13041.2|4.2e-05,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.4e-14,PPR_2|PF13041.2|2.2e-07,PPR_2|PF13041.2|0.0019,PPR_2|PF13041.2|2e-12,PPR_2|PF13041.2|0.00045,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|9.4e-09,PPR|PF01535.16|8.9,PPR|PF01535.16|6e+02,PPR|PF01535.16|19,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|2.5,PPR|PF01535.16|25,PPR|PF01535.16|4.2e-08,PPR|PF01535.16|0.82,PPR|PF01535.16|0.0048,PPR|PF01535.16|0.00013,PPR_3|PF13812.2|0.083,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|5.9e+02,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.064,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.18,PPR_1|PF12854.3|3.4e+02,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|0.00035,PPR_1|PF12854.3|1.7e-05,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|3e-10,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|3e+02 S_Transcript_81053:160-1761(+)
ATGGCAGTTTCAACTACAAGAAGGACCTTAATTAAACTCCCAATTTTTCTTCCTTCCATCTCTAAAACCCTAACCTCGTTCTCCGCCTCCTCCTCCTCCTCCTCCTCCTCATCATCATCAACCAAACCATTACTTCCAACACTCCAACCCTGCCATGATGCAGAACTAATCTCCAACATTCTAATCCAACACCACAACCCCTTTCATGCAATGGAATCTTCCCTCCAAATTCATGGCATTTCCCTTTCTTCTCACCTTCTTCACCAAACCCTTCTTAGACTTTCCCACTTTTCCAAAATTGCCCTTTCCTTCTTCTCATGGGCTCTACAGAACAACCACCCCACCACCACCAATACAAATGCCATTGATGTTAATTGCTTCAATTTAATGATTGACATTTTGGGTAAAGTTCATCAATTTGATGTTTCTTGGCAACTCATTATCCAAATGCAAACCCTCAATTTAAAGCCTCAAGCTTCCACCTTTTTGATCTTGACCCGCCGTTTGATCGCTTCCGGGTTGACCCGGCAAGCAATTCGAGCATTTGATGATATGCCCACCTTTACTGAGTCTGAACCCAGTAAAGATGATGTCTTGTATTTGCTTGATACTTTGTGTAAATATGGGTATATCAGGGTTGCAATGGAGGTTTTCAATAAGAGGAAAATGATGGGTTTTGATTTGTGTGTTAAAGTTTATACTGTTTTGATGAGTGGGTGGTGTAAAGTTAAGAGGGTTGATATGGGGGAAAAGTTGTTGAGGGAGATGGTTGATAAGGGTATTGAGCCTAATGTGGTTTGTTATAATGTTTTGCTTGATGGGATTTGTAGGAAAGCTAGTTTGCACCCTGATGAGAGGTTTGAGAGGACTATTAGGGCTGCAGATAAGGTGTTTGATGAAATGCGTGAGAGAGGGATCGAGCCTGATGTAACGAGTTATTCTATTGTGCTTCATGTTTGTAGCCGTGCTCATAAGCCTGCGTTGACGTTGGATAGGTTGGAGATGATGAAGACGAAAGGGATTTGCCCAAGTGTGGCTACTTATACTTCGGTTGTCAAGTGTCTTTGCTCTTGTGGGAGGTTAGAAGAGGCTGTGGGATTGCTTAATGAGATGGTTAGTAATGGGGTTACTCCGACTGCTATTACGTATAATTGTTTCTTCAAGGAGTTTAGAGGCAGGAAAGATGCCGAAAAGGCTTTGAGTTTGTATCGAGGGATGAAGGAAGAGGGCGCGTGTGTGCCTAGCTTGCAGACGTATAACATCTTGGTGCAAATGTTTGTGAAGTTGAATAGGATGGAGATTGTACAGGAGATATGGAATGATATGAAAGAAACTGGGGCTGGACCGGATTTGGATTCATATACTGTATTGATTCATGGTTTGATTGAGAAGCAGAAGTGGAGAGAGGCTTGTGAATATTTTGTTCAGATGATCGAGAAGGGAATTCTTCCACAAAAGGTCACCTTTGAGACACTTTATCGAGGTTTGATACAGGCTGACAAGTTGCGAACTTGGAGAAGACTGAAGAAGAAACTTGATGAGGAGTCAATATCATTTGGCTCTGAGTTTGAACATTATCACCTTCAACCATACAAGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81053.p1 GENE.S_Transcript_81053~~S_Transcript_81053.p1 ORF type:complete len:587 (+),score=109.92,PPR_2|PF13041.2|4.2e-05,PPR_2|PF13041.2|2.7e+02,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.4e-14,PPR_2|PF13041.2|2.2e-07,PPR_2|PF13041.2|0.0019,PPR_2|PF13041.2|2e-12,PPR_2|PF13041.2|0.00045,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|9.4e-09,PPR|PF01535.16|8.9,PPR|PF01535.16|6e+02,PPR|PF01535.16|19,PPR|PF01535.16|1.1e-05,PPR|PF01535.16|1.1e+02,PPR|PF01535.16|2.5,PPR|PF01535.16|25,PPR|PF01535.16|4.2e-08,PPR|PF01535.16|0.82,PPR|PF01535.16|0.0048,PPR|PF01535.16|0.00013,PPR_3|PF13812.2|0.083,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|5.9e+02,PPR_3|PF13812.2|0.00044,PPR_3|PF13812.2|0.022,PPR_3|PF13812.2|0.064,PPR_3|PF13812.2|1.6e-05,PPR_3|PF13812.2|25,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.18,PPR_1|PF12854.3|3.4e+02,PPR_1|PF12854.3|4.1e+02,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|0.00035,PPR_1|PF12854.3|1.7e-05,PPR_1|PF12854.3|3.9e+02,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|3e-10,PPR_1|PF12854.3|25,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.48,PPR_1|PF12854.3|3e+02 S_Transcript_81053:160-1761(+)
MAVSTTRRTLIKLPIFLPSISKTLTSFSASSSSSSSSSSSTKPLLPTLQPCHDAELISNILIQHHNPFHAMESSLQIHGISLSSHLLHQTLLRLSHFSKIALSFFSWALQNNHPTTTNTNAIDVNCFNLMIDILGKVHQFDVSWQLIIQMQTLNLKPQASTFLILTRRLIASGLTRQAIRAFDDMPTFTESEPSKDDVLYLLDTLCKYGYIRVAMEVFNKRKMMGFDLCVKVYTVLMSGWCKVKRVDMGEKLLREMVDKGIEPNVVCYNVLLDGICRKASLHPDERFERTIRAADKVFDEMRERGIEPDVTSYSIVLHVCSRAHKPALTLDRLEMMKTKGICPSVATYTSVVKCLCSCGRLEEAVGLLNEMVSNGVTPTAITYNCFFKEFRGRKDAEKALSLYRGMKEEGACVPSLQTYNILVQMFVKLNRMEIVQEIWNDMKETGAGPDLDSYTVLIHGLIEKQKWREACEYFVQMIEKGILPQKVTFETLYRGLIQADKLRTWRRLKKKLDEESISFGSEFEHYHLQPYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST