Transcript Information: S_Transcript_81271.p1


Annotated TAIR IDAT3G55070.1
Annotated Gene NameLisH/CRA/RING-U-box domains-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20408377-20410887 | Forward length=418
E-Value1.5E-214
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.505512953496
Replicate 219.71474167288
Replicate 319.109341002285
Condition 2: 8 Hour
Replicate 122.053365488601
Replicate 224.662941572711
Replicate 323.88402201522
Condition 3: 24 Hour
Replicate 121.274635527988
Replicate 219.478135250355
Replicate 317.675689753786


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81271.p1 GENE.S_Transcript_81271~~S_Transcript_81271.p1 ORF type:5prime_partial len:498 (+),score=97.07,CLTH|PF10607.5|1.6e-37,zf-RING_UBOX|PF13445.2|8e-08 S_Transcript_81271:2-1495(+)
GACAATCACACCACAAGACACACCACCTCAACAAGAAGCAAGAGAAAAATAGAATCTCCCCTTGGACAAACCAAATACAACACCAAACCACAAACGACACCGTTTCCTTCCCCAAAACCACACTCATCCATTTCTTCTTCCTCAATCATCAATTCATCATCATCATCATCATCATCACCAACACCACCTTCTCCCCCAATTCTCCCCATCCAAACCATCCGATCTCAAACTCCTCCAATGGAAGTCGACCCTCTTCCAAATGGCAACTCCACCACAAACACCACCACCAACCCTTCATCCACTCAAACCCCACCATCAAAACTAACTCCAACTCCAACAACAAACCCCACAACACCCCACTTATCAGAATCACTCAAACTAGAACACCAGTTCTTGAGAGTCCCCTTTGAGCACTATAAGAAAACCATTCGTACCAACCACCGTGCCGTCGAAAAGGAGGTTTCTTCTGTCATTTCTGCTGTTGATTCAACTTCTCCTGACTTGTCCCCTGATGATGCTGTTACCCATCTCTCTTCTCTTGTTTCTAGGCTTCAAGGCCTCAAGAGAAAGTTGGAAGAGGGAAGCCGAACTGAGAACTTGCAAGCACAACGCTGTCGAGCTCGGTTAGATCATTTGGAATCTGCAGATGCGGACTTATCAGAATGGAGTAACACACGCTTGAAGCGGATTCTTGTGGACTATATGCTTCGTATGTCATATTATGAGAGTGCAGTAAAGTTGGCTGAAACCAGCAATATACAGGATCTTGTTGATATTGATGTGTTTCATGAAGCTAGAAGAGTAATTGAAGCTCTTCAAAATAAGGAGGTAGCTCCTGCATTAGCATGGTGTGCTGACAACAAGTCCAGGCTGAAGAAGTCAAAGAGTAAATTTGAATTTCAGCTAAGACTCCAAGAGTTCATAGAATTGGTAAGAGCTGATAATAACCTGCGTGCAATTCATTATGCTCGAAAGTACCTAGCACCTTGGGGAGCCACTCATATGAAAGAGTTGCAGAGAGTTATTGCGACACTTGCTTTTAAAAGCAGTACTGAATGTGCTACCTACAAGGTTCTTTTTGAACCCAAACAATGGGATTTCCTGGTGGACCAATTCAAGCAGGAATTCTGTAGGTTGTACGGCATGGCCCTTGAACCTTTGCTTAATATCTATCTTCAGGCTGGCTTGTCTGCTTTAAAAACTCCTTTCTGCTATGAAGACGATTGTCCAAAAGATGATCCACTGTCTCAGGAAAGCTTCCGTAAACTTGCAATGCCCCTACCATTCTCAAAGCAGCATCACTCTAAGCTTGTTTGCTACATAACAAAGGAACTAATGGATACAGAGAATCCACCAATGGTCTTACCAAATGGTTATGTCTACAGCACCAAGGCTCTTGAGGATATGGCGCATAGAAACAACGGTCAAATTACTTGTCCAAGGACAGGTTTTGTGTGCAGTTATGCTGATCTTGCTAAGGCTTATATTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81271.p1 GENE.S_Transcript_81271~~S_Transcript_81271.p1 ORF type:5prime_partial len:498 (+),score=97.07,CLTH|PF10607.5|1.6e-37,zf-RING_UBOX|PF13445.2|8e-08 S_Transcript_81271:2-1495(+)
DNHTTRHTTSTRSKRKIESPLGQTKYNTKPQTTPFPSPKPHSSISSSSIINSSSSSSSSPTPPSPPILPIQTIRSQTPPMEVDPLPNGNSTTNTTTNPSSTQTPPSKLTPTPTTNPTTPHLSESLKLEHQFLRVPFEHYKKTIRTNHRAVEKEVSSVISAVDSTSPDLSPDDAVTHLSSLVSRLQGLKRKLEEGSRTENLQAQRCRARLDHLESADADLSEWSNTRLKRILVDYMLRMSYYESAVKLAETSNIQDLVDIDVFHEARRVIEALQNKEVAPALAWCADNKSRLKKSKSKFEFQLRLQEFIELVRADNNLRAIHYARKYLAPWGATHMKELQRVIATLAFKSSTECATYKVLFEPKQWDFLVDQFKQEFCRLYGMALEPLLNIYLQAGLSALKTPFCYEDDCPKDDPLSQESFRKLAMPLPFSKQHHSKLVCYITKELMDTENPPMVLPNGYVYSTKALEDMAHRNNGQITCPRTGFVCSYADLAKAYIS*

Click here to download the sequence:
Link to NCBI Protein BLAST