Transcript Information: S_Transcript_81278.p1


Annotated TAIR IDAT4G32520.1
Annotated Gene Nameserine hydroxymethyltransferase 3
Annotated Gene Symbol(s)SHM3, AtSHMT3
Annotation TypeOrtholog
Chromosome Positionchr4:15689642-15692334 | Reverse length=529
E-Value2.6E-230
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.8710004117268
Replicate 28.5897794010591
Replicate 310.180390318148
Condition 2: 8 Hour
Replicate 121.097919487084
Replicate 224.280913056983
Replicate 322.6800618517
Condition 3: 24 Hour
Replicate 19.4369896679367
Replicate 26.9502355500799
Replicate 37.3312075737538


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81278.p1 GENE.S_Transcript_81278~~S_Transcript_81278.p1 ORF type:5prime_partial len:375 (+),score=64.41,SHMT|PF00464.15|1.8e-145 S_Transcript_81278:1-1125(+)
GAGAAGTGGGGTGTAAATGTTCAACCATTGTCTGGCTCGCCTGCAAATTTTGAGGTTTACACTGCACTCCTGAACCCACATGACCGAATCATGGGTCTAGATTTACCTCATGGAGGACATTTGTCTCATGGGTTTATGACTCCTAAAAGACGAGTTTCAGGAACATCGATTTACTTTGAATCTATGCCTTACCGCCTTGATGAGTCCACAGGTTTGGTCAATTATGACATGCTTGAGAAAACTGCCACTCTATTTCGGCCAAAACTCATCATTGCTGGAGCTAGTGCATATCCTAGGGATTTTGACTATCCTCGCATGAGGAAGATTGCAGATGCAGTTGGCGCATTTCTTATGATGGACATGGCACATATAAGTGGGCTCGTTGCTGCTTCTGTAGTTGGCAACCCATTTGAGTACTGTGATATAGTGACCACGACAACTCACAAGTCTCTACGAGGTCCTAGAGGTGGAATGATCTTCTACAAGAAGGATACCATATTAGGAGTTGATTTAGAATCTGCCATTAATAACGCTGTCTTCCCTGGTTTACAGGGTGGTCCACACAACCACACAATAGGTGGACTCGCAGTTTGCCTGAAGTATGCACAATCTCCGGAGTTTAAGGCATACCAAAACAATGTGGTCTCAAACTGTAGAGCTCTTGCAAGCAGATTGCTGGTATTGGGATACAAGCTAGTTTCTGGTGGGAGTGATAACCACCTCGTTCTTGTGGATCTAAGACCAATGGGAATTGATGGTGCTCGAGTTGAGAAAATCCTTGACTTGGCTTCTATCACCTTGAATAAGAACTCTGTGCCAGGTGATAAAAGCGCCTTAGTCCCAGGTGGGATACGTATTGGATCACCTGCAATGACAACCCGGGGATTCACAGAGAGGGAATTTGTGGCAACAGCAGATTTCATTCACGAGGGTGTCCAAATAACTATTGAAGCAAGCAAGTTACTAGCCCCCAAAGCGAAGCTTCAAGAATTCTTGAAATTTGTGGCATCTCCGGATTTCCCCTTGCGAGATCACATTTCAGACCTTCAGAAGAGAGTTGAGGCTTTGACAACCCAGTTCCCGTTTTGCCCGGATTGTGAATGCAGTTCTGATTGTTTGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81278.p1 GENE.S_Transcript_81278~~S_Transcript_81278.p1 ORF type:5prime_partial len:375 (+),score=64.41,SHMT|PF00464.15|1.8e-145 S_Transcript_81278:1-1125(+)
EKWGVNVQPLSGSPANFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVNYDMLEKTATLFRPKLIIAGASAYPRDFDYPRMRKIADAVGAFLMMDMAHISGLVAASVVGNPFEYCDIVTTTTHKSLRGPRGGMIFYKKDTILGVDLESAINNAVFPGLQGGPHNHTIGGLAVCLKYAQSPEFKAYQNNVVSNCRALASRLLVLGYKLVSGGSDNHLVLVDLRPMGIDGARVEKILDLASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEREFVATADFIHEGVQITIEASKLLAPKAKLQEFLKFVASPDFPLRDHISDLQKRVEALTTQFPFCPDCECSSDCLD*

Click here to download the sequence:
Link to NCBI Protein BLAST