Transcript Information: S_Transcript_81286.p1


Annotated TAIR IDAT4G32520.1
Annotated Gene Nameserine hydroxymethyltransferase 3
Annotated Gene Symbol(s)SHM3, AtSHMT3
Annotation TypeOrtholog
Chromosome Positionchr4:15689642-15692334 | Reverse length=529
E-Value5.4E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8387274973055
Replicate 24.0114162831845
Replicate 34.694514639462
Condition 2: 8 Hour
Replicate 111.321843586551
Replicate 211.389304762043
Replicate 39.4564851193008
Condition 3: 24 Hour
Replicate 15.0044642178452
Replicate 23.5437959919379
Replicate 33.9438105797091


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81286.p1 GENE.S_Transcript_81286~~S_Transcript_81286.p1 ORF type:3prime_partial len:275 (+),score=55.77,SHMT|PF00464.15|5.2e-88 S_Transcript_81286:160-981(+)
ATGCAAGCTTGCAGTGGAGCAGCAACAACCTCCCTAATGGGTTCCATTCATCAACCTCTATTACCCGAAATAAACTCCCCTTCTTCTCTTTTTTCTCATAGTAAAGGGATTAACAAGTTCACTATTTTACCATTAAAAAATTATTCTTCCATAAATTTTTCAAGGTCTTCTTCTTCTTCCTCTATCTCCAACAGTTTGGTCACTGGTAGACCACCCTCCTCTATCTCTGTTCCTGCCCCTGATATTGCAGGTGATGGAAGCAGCTTCAAAGACTATGGGCTCAATGATGCTGATCCCGAAGTGCATAGCATCATTGGTAAAGAAAAGCAAAGACAGTTTAGAAGTCTTGAGCTTATTGCATCAGAGAACTTCACATCTAGAGCCGTGATGGAAGCTGTTGGTTCTTGTCTCACAAACAAATATTCTGAAGGATTACCTGGGAAAAGGTATTATGGTGGCAATGAATATATTGATGAACTTGAGATCCTTTGTCAACAGAGGGCTTTGGAAGCATTTCATCTGGATGGAGAGAAGTGGGGTGTAAATGTTCAACCATTGTCTGGCTCGCCTGCAAATTTTGAGGTTTACACTGCACTCCTGAACCCACATGACCGAATCATGGGTCTAGATTTACCTCATGGAGGACATTTGTCTCATGGGTTTATGACTCCTAAAAGACGAGTCTCAGGAACATCAATTTACTTTGAATCTATGCCTTATCGCCTTGATGAGTCCACAGGTTTGGTCAATTATGACATGCTTGAGAAAACTGCCACTCTATTTCGGCCAAAACTCATCATTGCTGGAGCTAGTGCATATCCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81286.p1 GENE.S_Transcript_81286~~S_Transcript_81286.p1 ORF type:3prime_partial len:275 (+),score=55.77,SHMT|PF00464.15|5.2e-88 S_Transcript_81286:160-981(+)
MQACSGAATTSLMGSIHQPLLPEINSPSSLFSHSKGINKFTILPLKNYSSINFSRSSSSSSISNSLVTGRPPSSISVPAPDIAGDGSSFKDYGLNDADPEVHSIIGKEKQRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELEILCQQRALEAFHLDGEKWGVNVQPLSGSPANFEVYTALLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVNYDMLEKTATLFRPKLIIAGASAYP

Click here to download the sequence:
Link to NCBI Protein BLAST