Transcript Information: S_Transcript_81408.p1


Annotated TAIR IDAT2G42975.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:17873998-17874820 | Forward length=187
E-Value9E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1159.94956864818
Replicate 2150.3871778002
Replicate 3162.31489665414
Condition 2: 8 Hour
Replicate 143.085992681554
Replicate 232.188067940831
Replicate 330.016193566198
Condition 3: 24 Hour
Replicate 1206.63476526307
Replicate 2178.18843693445
Replicate 3209.11133754242


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81408.p1 GENE.S_Transcript_81408~~S_Transcript_81408.p1 ORF type:complete len:196 (+),score=41.72 S_Transcript_81408:258-845(+)
ATGGCTTTGAACATTACAACAACAGCTAGTGGCACTAAGGTTTTGTTTGGGAAGGCCCCAAAAACAACAATTATCCCAAAAAATAAGATCTATAATTACCAGACACCATACTCATTAAGGTCAGTAGCTGCTCAATCAGAAGGAATTCAAGGCAGAGTTACTGAGCAAGACAGAGGAGCCTCTGCTTCTTCTTCTGATGATTCTGAAGGGGTGTTCCAATCTGCAAGGGCTCAATTGGATCTATTAGATCAACTCACCACCTCATCGGTCGGCTCATCTACTGGTGCTGGTTATGAAAGCGATTCGGGTTCAACTGGGAAAGGAACCATTAGAGAGCAGCTCGCAAGTTTAGTAGGAGACCGAGATGATGATTTCACCATTCCCCTTGGTAAGAATCTGAAGAAAGTGAGCCCCAAGTTCTTGACCACATCTCAGAAAAGAAACATCAGAAGACAAGCTTACCTAAATGAAGTTTCCCAGAGGAATGATTCAGTTTTCTTTGCCACCATAGGAGCGTTTGTACTTCTCCCACCTCTTGTGATCCTTGGGATTGCTATTTTAACTGGCTATGTACAGCTATCTCCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81408.p1 GENE.S_Transcript_81408~~S_Transcript_81408.p1 ORF type:complete len:196 (+),score=41.72 S_Transcript_81408:258-845(+)
MALNITTTASGTKVLFGKAPKTTIIPKNKIYNYQTPYSLRSVAAQSEGIQGRVTEQDRGASASSSDDSEGVFQSARAQLDLLDQLTTSSVGSSTGAGYESDSGSTGKGTIREQLASLVGDRDDDFTIPLGKNLKKVSPKFLTTSQKRNIRRQAYLNEVSQRNDSVFFATIGAFVLLPPLVILGIAILTGYVQLSP*

Click here to download the sequence:
Link to NCBI Protein BLAST