Transcript Information: S_Transcript_81446.p1


Annotated TAIR IDAT3G11110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3479979-3480455 | Forward length=158
E-Value3E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.974779166223
Replicate 213.714707022239
Replicate 313.757284213713
Condition 2: 8 Hour
Replicate 111.527238009261
Replicate 211.730104421911
Replicate 310.024209414234
Condition 3: 24 Hour
Replicate 112.044206032652
Replicate 28.5754962721314
Replicate 39.6798116365581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81446.p1 GENE.S_Transcript_81446~~S_Transcript_81446.p1 ORF type:complete len:185 (+),score=5.20,zf-RING_2|PF13639.2|1.4e-13,zf-RING_11|PF17123.1|2.6e-10,zf-rbx1|PF12678.3|2.4e-09,zf-C3HC4|PF00097.21|5e-08,zf-C3HC4_2|PF13923.2|3.6e-07,zf-ANAPC11|PF12861.3|8.9e-06 S_Transcript_81446:168-722(+)
ATGTCAAATTTGGACTACCACCACACGCGCCGCCTTCTAAACCACCTGCACACACCCCAAGAAAACTCCCACTTACTTCACTGGCATTACACCGAGCTTGACGACCATAACTTCCAAATCCACGGTCAAACCCTCTTTTACCTCTTCATCCTCTTCTCAATCATCCTCTTAGTAACTCTCCTCCTCCTCTACGCGCGTTGGTACTTCCGTTTCCGTCACCTTCACTCAGCTGGCCCTGTCCACTACCATAACAACCAGTACACCTCACACGCGGCGCCTTGCACGGAGGCGCGTGGACTTGACCCAGCTGTCATCAAGGCCATGCCCATCATTCTCCACCAAGAAACACCCGTTGAAAGAGAAGATGAGATGGAGTGTTGTATTTGTTTAGGAGTTTTTGAAGATGGGGATAAAGTTAAAGTGTTGGCTGAGTGTAGACACCGTTTTCACTCTGATTGTGTGGATCGTTGGCTCCTCGCTCAGTCCAGTTGCCCTCTTTGTCGAGTCTCTCTCCGAGTCCACCCGCCCTCTGACTCGCCACTTGCTCAAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81446.p1 GENE.S_Transcript_81446~~S_Transcript_81446.p1 ORF type:complete len:185 (+),score=5.20,zf-RING_2|PF13639.2|1.4e-13,zf-RING_11|PF17123.1|2.6e-10,zf-rbx1|PF12678.3|2.4e-09,zf-C3HC4|PF00097.21|5e-08,zf-C3HC4_2|PF13923.2|3.6e-07,zf-ANAPC11|PF12861.3|8.9e-06 S_Transcript_81446:168-722(+)
MSNLDYHHTRRLLNHLHTPQENSHLLHWHYTELDDHNFQIHGQTLFYLFILFSIILLVTLLLLYARWYFRFRHLHSAGPVHYHNNQYTSHAAPCTEARGLDPAVIKAMPIILHQETPVEREDEMECCICLGVFEDGDKVKVLAECRHRFHSDCVDRWLLAQSSCPLCRVSLRVHPPSDSPLAQV*

Click here to download the sequence:
Link to NCBI Protein BLAST