Transcript Information: S_Transcript_81475.p1


Annotated TAIR IDAT2G47980.1
Annotated Gene Namesister-chromatid cohesion protein 3
Annotated Gene Symbol(s)SCC3, ATSCC3
Annotation TypeOrtholog
Chromosome Positionchr2:19631423-19636795 | Forward length=1098
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.7504705148284
Replicate 28.6332654790275
Replicate 39.1211357804764
Condition 2: 8 Hour
Replicate 110.991075263088
Replicate 29.9497986250958
Replicate 311.044080462001
Condition 3: 24 Hour
Replicate 19.2603310449258
Replicate 27.9857089702891
Replicate 36.7624321955746


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81475.p1 GENE.S_Transcript_81475~~S_Transcript_81475.p1 ORF type:complete len:1104 (+),score=256.66,STAG|PF08514.7|4e-27 S_Transcript_81475:235-3546(+)
ATGGAAGATCCTACCGCAGCTGCCTCAGAAGCTTCAGTTCGTCGCTCGAAAAGAGTTAGAACTGGCAAGTTGAATCTTGGAGAAAACCAAAGCCCTAATGAACCTGACAGAGAAGATTATTTTGACGATTTTGAGGAACCTCCGCGTAAACCTAAGCGAAATCGTGCTGCTGAGACTCTTGATGATTCTAAACTTGACCTAACTCTCATAGAGGCTGTTAGAGGGAGCAGGAAAAATATTCCTCAAGTGGTCAAGCTGTGGGTTGAGCATTATGAAAAGGATCCAAAACCAGCGTTGGTTGATCTTTTGAGTATGCTGTTTGAGTCGTGTGGTGCGAAGTACCACATAGATGGAGATCCTGTGGAGGACGCTGATGTTGATAGTGTGGTGCTTGCTCTGGTCAATCTTGCCAAGAAGGGTGAAGTCGAGGACTACCAAAGCTCGAAACGGAAGGACTTCAATAACTTTAAAGATAACCTTGTTTACTTTTGGGACAATTTGATCATTGAATGTCAGAATGGGCCTCTATTTGATGGTCTTTTGGTTGACAAGTGCACAGACTATATCATTGCTTTGTCATGCACTCCACCACGTGTTTTTCGCCAAGTTGCTTCCTTGATTGGCCTTCAACTTGTCACTTCATTTATCACAATTGCGAAGATGCTTGGATCACAACGTGAAACTACTCAGAGACAATTGAATGCTGAAAACAAGAAAAGGGCAGATGGCCCTCGAGCAGAGTCCCTCAATAAAAGATTGATGACAACTCATGAAAAGATAACTTCAATAGAAGAGATGATGGACAAGATATTTAAAGGGTTATTTATGCATAGATATCGAGATATTGATCCCAATATACGAATGTCCTGCATACAGTCCTTGGGTGTCTGGATTTTGTCATACCCTTCGCTTTTTCTACAGGATAGATACTTGAAGTATCTCGGATGGACGCTGAACGACAAAAGTGCTGGTGTGAGAAAAGCTTCTGTCGTTGCATTGCAAAGTCTCTATGAAGTGGATGACAATGTTCCATCCCTTGATCTCTTCACACAAAGGTTTTCAAACAGGATGATTGAACTTGCTGATGATATTGATGTCTCTGTGGCTGTCTGTGCCATAGGACTTGTGAAGCAGTTGCTAAGACATCAGCTCTTATTGGATGATCACTTAGGTCCTTTGTATGATCTGCTTGTTGTTGAATCTCCAGAAATTAGGCGTGCTATAGGGGAGCTGGTTTATGATCACCTGATTGCTCAGAAATTTAACAGCTCTTTATCCAAAGCTGATGGCGAGTCTTCCCTGGTTACGCTTAGTAGAATGTTACAAATATTGAGAGAATTTTCAACTGATCCTATACTAATTACTTATGTCATCGATGATGTCTGGGAGTACATGAAGGCCATGAAAGATTGGAAGTGTATCATCTCCATGCTCCTCGATGAAAACCCATCAATTGAGCTTACTGAAATTGATGCAACAAATTTGATACGGCTTCTTTGTGCATCTGCCAAGGGGGCTGTTGGAGAGAGGATCGTACCTGCGTCCGATAATCGAAAACAATACTATACCAAGGCGCAAAAGGAAGTTCTTGAAAACAACAAGCGGGACTTAACTGTGGCCATGATGAAGAACTACCCACAGCTTCTGCGTAAATATGTGGCTGACAAGGCAAAAGCTCCATCCTTGATTGAAATGGGCCTTCAAATGAATCTTGAGCTTTATTCACTAAAGAGACAAGAACAGAACTTTAGAACTGTGCTTCAACTGATATGTGAGGCATTTTTCAAACACGGTGACAAGGACACTCTCAGATCTTGTGTAAAAGCAATGAACTTCTTCTCAGTGGAGAGTAAAGGAGAACTGCAAGATTTTGCTAGCAATAAACTGAAAGAACTTGAGGATGAACTCATAGCGAAGCTCAAGACAGCTATGAAGGAAGTAGCGGAAGGTGATGATGAATACCCTCTTCTTGTGAACTTAAAAAGACTCTATGAGCTCCAGTTGTCAAGGTCTGTACCTGTTGACAGTTTATATACAGAGTTTCCCTCTATGCTTGCGAGTTTCAGAAATATAAATGATGAGGTGAACAGCTTTTTGCTGCTGAACATGTTCCTGCACATAAAATGGTGTTTGTATAGTATTGTGAACTCGGAAACTGTATCTGAGGTGTCTGTCTCTTCTTTACTATCCAAACGTGATACCTTATTCAAGCAACTGGAATCTTTCCTTCCCACTTCTCAAGCTGAAACAGATACTGATGTGGGGAGACAGCTTGCTTGTAGAGTCTGTACGATTCTTGTTGAGCTCTGGTGCTTATTCAAAAAATCTAAGTTTTCTTCTACTGCTCTGGAAGTTCTGGGCTTTTGTCCAGAACAGTCTATCGTCGAGAGATTCTGGAAACTTTGTGAGCAGCAGCTTAACATTTCAAATGAGACTGAAGATGAAGATGTCAATAGAGAGTATATTGAAGAGACAACTCGAGATACAGTTATAATTGCCGCTTCACAATTGGTGGCTAATGATACTGTTCCCAAGGAATATCTTGCTCCAGAGATCATCTCTCATTTTGTAATGCATGGGAGCAACATATCCGAGGTGGTTAAGCAGCTAATAGCTATTCTAAGGAAAAAAGATGAGAATATCTTTAGCATTTATCTTGAAGCAATCAAAAGGGCCTATCATCGACATATGGTCCTGCGTTTTAAGAATGATGACAGGGCTTCTGTGAACAAGTCTTTTCTTGATTGCAAGGAGCTTGCTAAGCAGCTATCAGCAACAATTGTGGGTGTGGCAAGAAGTAGGTATAGATCAGACATCCTGAAGTTTGTGGAGGATGGTATAAAATATGCTTTTGCAAACATACCTCATCAGTTATCTTTCTTAGAAGGTGCTGTCCTCCATTTTGTTGAGAAACTTCCAGTCACAGATGTTACTGAAGTCTTGAAAAATGTTCAAGGGCGTACAGAGAATATAAACACAGATGAGGATCCTAGTGGTTGGCGCCCCTACTATGTCTTTGTTGAGACCCTACGAGAAAAATGTGCAAAAATGGAAGCTCTTGCAGGTGCTGATGAGAAAGAAGGGACTTCAATAAGACGTCGAGGTCGTTCGGCACGTCCACCCAAACATAGTAAAGTACAGGGAAATAAATTATTTGAGGACCACAGTTCCAGTGAGGAAGAGGACACAATTAGCTCATCTGACCAAGATGCTCCAGAAGAAGATAAGCAGGATGATGAAGAGGATACTGCTTTGATTCATGTCATGAAATCATCAGCCAAATTCAAGTCAAGAACAGCTTCTAGACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81475.p1 GENE.S_Transcript_81475~~S_Transcript_81475.p1 ORF type:complete len:1104 (+),score=256.66,STAG|PF08514.7|4e-27 S_Transcript_81475:235-3546(+)
MEDPTAAASEASVRRSKRVRTGKLNLGENQSPNEPDREDYFDDFEEPPRKPKRNRAAETLDDSKLDLTLIEAVRGSRKNIPQVVKLWVEHYEKDPKPALVDLLSMLFESCGAKYHIDGDPVEDADVDSVVLALVNLAKKGEVEDYQSSKRKDFNNFKDNLVYFWDNLIIECQNGPLFDGLLVDKCTDYIIALSCTPPRVFRQVASLIGLQLVTSFITIAKMLGSQRETTQRQLNAENKKRADGPRAESLNKRLMTTHEKITSIEEMMDKIFKGLFMHRYRDIDPNIRMSCIQSLGVWILSYPSLFLQDRYLKYLGWTLNDKSAGVRKASVVALQSLYEVDDNVPSLDLFTQRFSNRMIELADDIDVSVAVCAIGLVKQLLRHQLLLDDHLGPLYDLLVVESPEIRRAIGELVYDHLIAQKFNSSLSKADGESSLVTLSRMLQILREFSTDPILITYVIDDVWEYMKAMKDWKCIISMLLDENPSIELTEIDATNLIRLLCASAKGAVGERIVPASDNRKQYYTKAQKEVLENNKRDLTVAMMKNYPQLLRKYVADKAKAPSLIEMGLQMNLELYSLKRQEQNFRTVLQLICEAFFKHGDKDTLRSCVKAMNFFSVESKGELQDFASNKLKELEDELIAKLKTAMKEVAEGDDEYPLLVNLKRLYELQLSRSVPVDSLYTEFPSMLASFRNINDEVNSFLLLNMFLHIKWCLYSIVNSETVSEVSVSSLLSKRDTLFKQLESFLPTSQAETDTDVGRQLACRVCTILVELWCLFKKSKFSSTALEVLGFCPEQSIVERFWKLCEQQLNISNETEDEDVNREYIEETTRDTVIIAASQLVANDTVPKEYLAPEIISHFVMHGSNISEVVKQLIAILRKKDENIFSIYLEAIKRAYHRHMVLRFKNDDRASVNKSFLDCKELAKQLSATIVGVARSRYRSDILKFVEDGIKYAFANIPHQLSFLEGAVLHFVEKLPVTDVTEVLKNVQGRTENINTDEDPSGWRPYYVFVETLREKCAKMEALAGADEKEGTSIRRRGRSARPPKHSKVQGNKLFEDHSSSEEEDTISSSDQDAPEEDKQDDEEDTALIHVMKSSAKFKSRTASRL*

Click here to download the sequence:
Link to NCBI Protein BLAST