Transcript Information: S_Transcript_81484.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0068207540244
Replicate 23.8046832339025
Replicate 34.2222715909928
Condition 2: 8 Hour
Replicate 13.2759519317697
Replicate 23.214983203925
Replicate 33.1266059916127
Condition 3: 24 Hour
Replicate 15.8455089618042
Replicate 25.5031058832558
Replicate 35.3493731443953


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81484.p1 GENE.S_Transcript_81484~~S_Transcript_81484.p1 ORF type:complete len:1009 (+),score=85.47,RVT_1|PF00078.23|5.1e-18 S_Transcript_81484:844-3870(+)
ATGGGCCAGCCCATATCATTTCAAGCCCAAAGCTTGTGGGGACCTGCCCCCAAGGCTCACCCACCCCTTCTACACCACAAAAGGAAAAACCACCGCTGCTCAACCGGTTCCTACAACAGACACATGGCCTCCCACAAAAACCCCAATTCTAGAACCATCCCATTCCTATTCCAAAAGAATTACCCCCCGTCCACCACAAAATCTGAAAAATCCAACACCCATTTCCCCACTGAACCCCTAAGTAACTCCACTCAACTTCCCCTAAGTAACTCCACTCAACATGGAGCAGAAATCAATGATGGAGATTGTGGAAACCCCATCACTACCCTAACCGGAAATTTTTCCCATGGGCTACATCCTCGAGGAGAGGGAACCCATCAGGGTGAAGTTTGTGAACAAGACGGACTTCACCTTCGTCAACAAGTCTCAGGTGGCCATCTCCGAATTGGAACTTGCAGTGGTACAATATTGGTACAAGGAAGGAAATCAGCTCAAGAAGGTACCTCCAGCAGAGCTACGACACCTGATGTTGTTCCCCAGAGCTGCAGATCTGCCATGGACGGAGATGTTGATGCTAGACCAGGGATGGAATCTAGTCCCAACCCACAGATAACAGACATACTACACCTCCCCAAACCGTTAAGACTCTTTCTATGGTGGTGGTTTCAACAACATTGGAGGGGCAAAGAGACGTGCATGTACTTTCCCCCAGAACTAAGCCCGGTGCTCGACCCACCAACCTTTCTCCCGAGGCAGGCAAAGACATGCATCCTCAAGTGGGTATCAACGAGAGTGGTGGCAGCGAGCTTCATGGATGCACTGTTGATGTATCTGCTCGAAGGGGAAGCAACGGAAATAGAAGTGAAAGTCCAAAGAAAGGACAAATATTGGCCTGTCGAGAGAAGGTACCAGAAGATAGTCATCAAACAAGAGAGACAGTACTCTCACATTCCCCAAACCAATCTGTTGGTGGACACTCGGAGAAAGGGCTTAGGAAGAGCTCTCCTCGGCCTAAACCAGCCTCCAAATTTAATGCATAACATGAAGATCATTTACTGGAATGCGAGAGGCATAGCCCGCCCTTCTTTTACACAGAATCTTCGCTATCTCATCCAATACCAACACCTTGATTTTTGTATTATTTCTGAACCTAGAGTCAATAGAAACCAAACCGAGTCCATTGTCCAGAACCTGCCCTTCGAACACTGGGAGCTTATGGAGCCGGAAGGTTTTGCTGGAGGAGTTCTAGTTCTATGGAACTCTACCCTCACCTTTGAAACCATCACAAAAAAACAAGCAGGGTATCCACAGGATAATTCAGGAAACGAAGTGACCGGTGTCAGAGAGTTACATGATCATATCTTGAATTACTTTAAAAGTCTTTTTACCACTGAGGAAGTATCTGTACCTCTAGATCTCTCTAGAGAAGATTCCGACCTCCCTCCCATCTCCCTGTCCACCGTCCCCAATATTGAGGAAATTCGTTCAACTGTGTTTGGGATGGGGCCTACGAAGGCGCCTGGTCCTAATGGTATACATGCCCTGTTTTACCAGAACCAATGGGAAAATATAAGCCCAGACATAATACAATTTGTTCAAGCAACTTTCAGGGATAAAAAGTTCCATGAGGCCATCGATTCCTTCCTCATATGCCTTGTTCCCAAAATCCCTAATCCTGAAAAAATTAAACAATTCAGATCAATAGGCCTCTGTAATTCTATATACAAGATTATCACCAAAATTCTTGTGTTTAGACTTCGACCTTACCTACAGGATCTCATTTCCCCCCTTCAAAATAGCTTCATACCTGGCAGAGGTTCAAATGTCAACTTTATAGTTGCTTCAAAAATCCTTCATTCCATGAATAAAACAAAAGGTCTTAAGGGCTGGTTTGCTTTAAAAATTGACTTGGAAAAGGCATATGATAGACTTGAATGGAGTTTCATTAGGGGTTGTCTTAAATATTTGAACTTTAATGACGACACTCCAGTGCTTCGGTTATTATTAATGGCACTCTTTCTGACTCCTTCATGCCCTCTAGAGGGATTCGCCAGGGGGATCTCCTATCCCCGTATATCTTCATCCTCTGTCTTAATATGCTCTCTAAACTCATCCAAGACTCTTGTGATACTGGGGAGTGGAAAACCCTTTTGTGTAGGGAAAGCCAAAATTCCTATATCTCACCTCCTGTTTGTTGATGACCTCATCCTCTTTGGGGAAGCCTGTCAAGATACATTTTACTCAGTGAGGGATACCCTGAAGCTTTTCTGTAATGCCTCTGGTCAGAAGGTTAATTGTGATAAAAGCAAATTGTTTTTCTCCCCTAACACTCCACCAGCACTTGTGGAGCTGGGGGAGGACATTCTTCAAGTCAAGGCAGGGACTGACCTGGGCCAGTATTTGGGCTTTCCTTTGTCCCCCAAGAGACCCACGAAAAGGCAAGTCCAATTCATTGTGGACAAAGTGAAGAACAAACTTACCAATTGGAAAACAAAATTCCTTTCCAAAGCTGGTCGAATCTGCCTAATCAATTCTACTCTCAATGCTATCCCAAATTATTACCTGCAACAAATAGTTTTACCCAAATCCACTCTCAATGAACTTGATAACATTGTTATTAAATTTCTTTGGGGGGACTCTGAGGATCATAAGAAATTACATTTGGTGGATAAAGAGTTAGTTTTCCTTCCTAAGAATATGGGAGGTCTGGGGATTCGGAGTAACAATCTAATGGGCAAGGTCTTCATGGCCAAAAGAAACTGGAATTTGATGAATGATTCGACCAGCCTAGGTAATCAGGTGTTAAAAAGTAAATTTGTTTGGACCAGGTCAGAAGCGGTTAATTTTAGAAAGGGTTCAACTAATTGGCAGAACCTGGAGAAAGGCTGGGCCCTTTTTAAAAATAATATCTTTTGGCATCTGGGTGATGGTGCTCGAGTCTCCTTTTGGGAAGACAATTGGCCTCACATTGGGCCCATCAGGTCCCTTATTCATGGTCCTCTCTTACCCCCGAAGATATTTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81484.p1 GENE.S_Transcript_81484~~S_Transcript_81484.p1 ORF type:complete len:1009 (+),score=85.47,RVT_1|PF00078.23|5.1e-18 S_Transcript_81484:844-3870(+)
MGQPISFQAQSLWGPAPKAHPPLLHHKRKNHRCSTGSYNRHMASHKNPNSRTIPFLFQKNYPPSTTKSEKSNTHFPTEPLSNSTQLPLSNSTQHGAEINDGDCGNPITTLTGNFSHGLHPRGEGTHQGEVCEQDGLHLRQQVSGGHLRIGTCSGTILVQGRKSAQEGTSSRATTPDVVPQSCRSAMDGDVDARPGMESSPNPQITDILHLPKPLRLFLWWWFQQHWRGKETCMYFPPELSPVLDPPTFLPRQAKTCILKWVSTRVVAASFMDALLMYLLEGEATEIEVKVQRKDKYWPVERRYQKIVIKQERQYSHIPQTNLLVDTRRKGLGRALLGLNQPPNLMHNMKIIYWNARGIARPSFTQNLRYLIQYQHLDFCIISEPRVNRNQTESIVQNLPFEHWELMEPEGFAGGVLVLWNSTLTFETITKKQAGYPQDNSGNEVTGVRELHDHILNYFKSLFTTEEVSVPLDLSREDSDLPPISLSTVPNIEEIRSTVFGMGPTKAPGPNGIHALFYQNQWENISPDIIQFVQATFRDKKFHEAIDSFLICLVPKIPNPEKIKQFRSIGLCNSIYKIITKILVFRLRPYLQDLISPLQNSFIPGRGSNVNFIVASKILHSMNKTKGLKGWFALKIDLEKAYDRLEWSFIRGCLKYLNFNDDTPVLRLLLMALFLTPSCPLEGFARGISYPRISSSSVLICSLNSSKTLVILGSGKPFCVGKAKIPISHLLFVDDLILFGEACQDTFYSVRDTLKLFCNASGQKVNCDKSKLFFSPNTPPALVELGEDILQVKAGTDLGQYLGFPLSPKRPTKRQVQFIVDKVKNKLTNWKTKFLSKAGRICLINSTLNAIPNYYLQQIVLPKSTLNELDNIVIKFLWGDSEDHKKLHLVDKELVFLPKNMGGLGIRSNNLMGKVFMAKRNWNLMNDSTSLGNQVLKSKFVWTRSEAVNFRKGSTNWQNLEKGWALFKNNIFWHLGDGARVSFWEDNWPHIGPIRSLIHGPLLPPKIFA*

Click here to download the sequence:
Link to NCBI Protein BLAST