Transcript Information: S_Transcript_8152.p1


Annotated TAIR IDAT5G12440.1
Annotated Gene NameCCCH-type zinc fingerfamily protein with RNA-binding domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4035891-4038604 | Reverse length=650
E-Value8.2E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.264795243841
Replicate 226.994471929195
Replicate 321.832944922498
Condition 2: 8 Hour
Replicate 136.47268961592
Replicate 235.367260717215
Replicate 327.491174043483
Condition 3: 24 Hour
Replicate 119.499770998222
Replicate 218.264365799762
Replicate 319.509993172193


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8152.p1 GENE.S_Transcript_8152~~S_Transcript_8152.p1 ORF type:complete len:680 (+),score=167.68,RRM_1|PF00076.18|2.1e-07,RRM_1|PF00076.18|6.1e+02 S_Transcript_8152:762-2801(+)
ATGGAATCCTATGAAGCAACTAGAGCAGTATTTTCGAGGGTTCAAAGTATAGATCCAGAAAATGCTTCAAAGATTATGGGTTATATACTTCTACACCATGGGGAGAAAGACATGATACGGTTTGCTTATGGACCACAAACACTGATAGTTTCAATAGTAAACAGAGCCAAAACTGATTTAGGACTTTTGTCGAACGCCTCATCTGCACCAGCAGTTAGTCCTATTTCCGTTTCTAGGCCTAACCCACTTTCTCTTTCACTTCCTTCTCCAAGATTACCCACCAATGGGTTCAACCCTTCTTCTCCTTCTTCACCCTCAGTTTGGTCTCCACATCACTCTTTAAGCCCTAATGCTAATGCAAGTCATTCTTTTACTAATGGGTCTTTCTCATCTCAATCAGTTGGGTTTAGTGGGATTAGCCACAACAGTAGGGAGAATTTTGTGGATGAGTACCATTTGCAGGACCAAAATCTCACCTTTCTGAATGACCCATTAGCAACTGTGCCTTCTAAAACTGGGGACTATTTTGAGCAAGGTGTGGATTTGAGTATGAGTCCTAGTTGTAGGAGTGATTCTATGCTGTACCCATTTTGTTTCGATAACTCAGATGGAGGTAGTGTGGAGGGTAAGACTCATTTTCACAGGAGTTCTTCATTCAATGATGTTTATTATGGGACTGATGATTCAACTTCTGGGTTTGGTTTCAAGCCTTGTCTTTACTATGCTAAGGGCTTCTGCAAGAATGGGAGTACTTGTAAGTTTGTTCATGGTGCTGGGTTTCCTGATTCACCTGATAATTCTTCCCCCAAGTTTGATCCCTTTGAGCAGTGCCAAGAAGAGATGTTAAGGTCAAAGTTTGCTCAGCAACAAAGATTGGCTGCCCAATTGATGGCTAGTGGGGTTAATTTCCCTTACAAGAAGTTAAACTTTCTTCAAAGTGAGGCTCAAAGATCTGCAGCTGCAGCATTGATGATGGGTGAGGAGTTTCACAAGTTGAACCGAGTGAGGATGTCAAGAAATGAATTTTCTGGAATGGGTTTGAGAGGAGATTCAAATCCTGGTTCTAGACAAATTTACTTGACTTTCCCAGCTGATAGCACCTTCAAAGAAGAGGATGTTTCTCAGTATTTTAGCAACTTTGGACCAGTTCAAGATGTGAGGATTCCATATCAACAGAAGAGAATGTTTGGTTTTGTTACATTTGTGTATCCTGAGACTGTCAATATGATTTTGGCCAAAGGAAACCCCCACTTTGTTTGTGATTCTCGTGTCCTTGTCAAACCTTACAAGGAGAAAGGAAAAATTCCTTACAAGAAGCAACAACAGCAGCAGCAACTAGAAAGGGGAGATTTCTCATGCTCTAGTCCTTCTGGACTTGATTCTAGAGAGCCTTTTGACTTCCAGCTTGGGGGGAGAATGTTCTACAGTACACAAGAGATGTTGTTGAAGAAAAAGCTCGAGGAACAAGCTGATTTGCAACAGGCCCTTGAACTACAAGGTAGGAGGCTGATGAATTTGCAGCTCATGGATTTGAAGAATCATCTATATCACCAGCAGGCTGTCGGGTCTCCGGTACTATCTCCTAATCTGTCTCAATTGTCGTCAAATCTTAGTGCTCCTAACCTGTCTAATGGGACGAGCGAGGATATTTCAGAAGGAAGCGAAGAAAGTTCAACTGGAGCACCTGATCTGCAGTTAGGTGAGGGGGATAAGGCAGCTCCAGTTGTTGAGGGAAATGGCAATGTCCAAAACAAAGAGAGTCATTCCGTCGATGATGAATGTGAACTTCCTGAGAGCTTAGAACATATCCTTCCAGACAACCTCTTTGCCTCTCCTACTAAGAAGGGCTCTGAACGCCGATCATCATCGGTTTTCTCTTCTGCATTCGCGGAGCACAAAGATGGCGCTGCAATCACCAGCCCCTCGGTTGTTAATGGTGACTCGTCAATGCCTGCCTCATCACCTCTCCTGGCTACTCATAAATCTTGTTTCTTTGAGATGCCTAGGCTTTCCTCTGGGCAAAGAGCCCTAGGAATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8152.p1 GENE.S_Transcript_8152~~S_Transcript_8152.p1 ORF type:complete len:680 (+),score=167.68,RRM_1|PF00076.18|2.1e-07,RRM_1|PF00076.18|6.1e+02 S_Transcript_8152:762-2801(+)
MESYEATRAVFSRVQSIDPENASKIMGYILLHHGEKDMIRFAYGPQTLIVSIVNRAKTDLGLLSNASSAPAVSPISVSRPNPLSLSLPSPRLPTNGFNPSSPSSPSVWSPHHSLSPNANASHSFTNGSFSSQSVGFSGISHNSRENFVDEYHLQDQNLTFLNDPLATVPSKTGDYFEQGVDLSMSPSCRSDSMLYPFCFDNSDGGSVEGKTHFHRSSSFNDVYYGTDDSTSGFGFKPCLYYAKGFCKNGSTCKFVHGAGFPDSPDNSSPKFDPFEQCQEEMLRSKFAQQQRLAAQLMASGVNFPYKKLNFLQSEAQRSAAAALMMGEEFHKLNRVRMSRNEFSGMGLRGDSNPGSRQIYLTFPADSTFKEEDVSQYFSNFGPVQDVRIPYQQKRMFGFVTFVYPETVNMILAKGNPHFVCDSRVLVKPYKEKGKIPYKKQQQQQQLERGDFSCSSPSGLDSREPFDFQLGGRMFYSTQEMLLKKKLEEQADLQQALELQGRRLMNLQLMDLKNHLYHQQAVGSPVLSPNLSQLSSNLSAPNLSNGTSEDISEGSEESSTGAPDLQLGEGDKAAPVVEGNGNVQNKESHSVDDECELPESLEHILPDNLFASPTKKGSERRSSSVFSSAFAEHKDGAAITSPSVVNGDSSMPASSPLLATHKSCFFEMPRLSSGQRALGM*

Click here to download the sequence:
Link to NCBI Protein BLAST