Transcript Information: S_Transcript_81530.p1


Annotated TAIR IDAT3G04820.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1321453-1325949 | Reverse length=715
E-Value5.8e-317
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7275200330103
Replicate 25.8973806551295
Replicate 36.43118476728
Condition 2: 8 Hour
Replicate 111.313741674354
Replicate 211.4742995737
Replicate 310.527772765554
Condition 3: 24 Hour
Replicate 14.7128039009559
Replicate 25.0124847855422
Replicate 35.133387599413


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81530.p1 GENE.S_Transcript_81530~~S_Transcript_81530.p1 ORF type:complete len:737 (+),score=138.71,TruD|PF01142.14|0.0017,TruD|PF01142.14|1e-69,TruD|PF01142.14|0.0047 S_Transcript_81530:24-2234(+)
ATGTGGCAGAATAGAACGACGACATTTTTGAGCAAACTCAAACTCCTTAAACCCTACTCTTCTTCTTCCCTAACTCCGGCAACCATAACTGCTACAACGACGAAAACAATGACCTCCATTACCATCGAAGAAAATCCTAACGAACCTCAAAACTTCATTAAAAAACCTCACAAGAGTATAGAAGAACCAGACGTTGGTATTCTTTGCTACATCTCTAATCTCCCTGGTTTTCGCGGCATTCTTAAACAAAGGTACTCGGATTTTATTGTCAATGAAGTGGATTTGGATGGAAATGTTGTTCACTTAACTTCATTGCAAGTCCCCCCTGAGTTGGTGGAAAAGAAGGAAGAGAAGAAGGTGGCTGAGCAATCGGATAAAAGCTATACATCGGAAATTGAATCATTTAGGTCGATAGTAGGTGATTCGGATGCTGATCGGTTGAAAGAGTTCATTGAGAAAGTTAATAGTGGTGGTGAAGATCATCTTGCTCCATTACTTCTTTCTCCAAGTTCGGATAAATCCCATCGCACGGCAGTGCACAACTTCTTCAAGGAGAAACTGAAATTCCTGGTCACTGACACAATAGATGGGCCTGATGGCTCGTTGAAGTGCATTCGTGCGAGGCTGAATTCTGGAGGGAATACGAACAGGGGTAGACACTCTCGAAAGCGAAAAGATAGGGATGATAAGCCATTTGATAGAAGAGGATCAAATAATTGGCCAGAGCATCTTGGCAAGTTCCTTAGGTTTCATCTCTACAAGGAGAATAAGGACACTCAAGAGGCCTTGAGATTGATCGGAAAGATGCTAGGAGTCCAGCCAAGATCATTTGGATTTTCAGGTACGAAGGATAAGCGTTCGGTGTCTACACAAAGGGTAACAATGTTCAAGCAGCATGCTAGTAGATTAGCTTCACTCAATGAAAGGTTGATTGGTATAAAAGTTGGTAATTTCTGCCATGTTGAAGGAGGACTTCAGCTTGGGCAGCTCCTTGGCAATCGATTCACTATAACGCTGAGAGGAGTTGTTGCTGATTCTGAAGACACCATTAGAGCATCTGCGGATGTCTTAGGAAAGCATGGGTTCATTAATTATTTTGGACTACAGAGGTTTGGAAGTGGTTCAGTACCAACTCACCTTATTGGAGCTGCATTACTTCGTGGAGAGTGGAAAGATGCTGTTGATATGATCCTTGATCCAAGAGAAGGGGAAAGAGATGATATTAGAAAAATTCGTGAAAATTACAAGAAAAGCAATGATATCGAAGGGATGCTGAGGCGACTACCACATCATATGGTTGCTGAGAGGGCTGTTCTGCAGTGCTTAAAGAAATTTCCCGGAAATTACGTGCAAGCATTAAAGGCAATCCCTAGAACATTGAGAATGATGTATGTACACAGTTACCAGAGTTATTTGTGGAACCATGCGGCAAGTATCAGAGTGCACAAGTATGGAGCCGACAGGGTTGTTGTGGGAGATCTTGTATATTGCAAAGAAGAATGCAGTAAGGATGTCATTTCCGGCCACACAGACTGTGAAAATGATATATCTGATGAGGCTGACAATGATAGCAATCTTGAAGAACTTGCTGAAGTTGATCTTCCTGAAGAAAAGAATCTCACAGTCAAGGCTGTGGATGAAGAAGATCTGGTCCATCAAAAGTACACAATAAATGATGTCGTCCTTCCGTTGCCAGGTTCAAGGGCAATGTATCCAGCGAATGATGTTGCAGCTGTTTATCATGATTTGGCTAAGAAGGATAATATCAGCTTGACAGAGAGTGTACACAATGTTAAAGAATTTTCAATAACAAGTATGAGTGGAGGTTATAGATGCGTTTTCCAGAAACCAGGGGATTTTGAATGGGAATTACTGAAGTATACAGATCCTAGTACACCTTTGGCAGATACAGATTTGGATATTCTTGTCAAGTTCCAATCTGCAACGATGAATGAAAAAGAGGATGCAGTCAATGGCAGCAAAGTTACGTCATGTGATTCCGTAAATTTGTCAGAACACTATGATGGGGCGATGTCAGGCGACAGTAAGAGAGAAGGTGCAAGTCAAACCAACAATTTAGAGGCCACACAGACAGCACTCAAGCTTAGTTTTACACTTCCTGCTTCTTGCTATGCTACAATGGCTATAAGGGAGCTTCTCAAAACATCAACATCGGTGGCATTCCATAAAACATTGAATGACCAGATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81530.p1 GENE.S_Transcript_81530~~S_Transcript_81530.p1 ORF type:complete len:737 (+),score=138.71,TruD|PF01142.14|0.0017,TruD|PF01142.14|1e-69,TruD|PF01142.14|0.0047 S_Transcript_81530:24-2234(+)
MWQNRTTTFLSKLKLLKPYSSSSLTPATITATTTKTMTSITIEENPNEPQNFIKKPHKSIEEPDVGILCYISNLPGFRGILKQRYSDFIVNEVDLDGNVVHLTSLQVPPELVEKKEEKKVAEQSDKSYTSEIESFRSIVGDSDADRLKEFIEKVNSGGEDHLAPLLLSPSSDKSHRTAVHNFFKEKLKFLVTDTIDGPDGSLKCIRARLNSGGNTNRGRHSRKRKDRDDKPFDRRGSNNWPEHLGKFLRFHLYKENKDTQEALRLIGKMLGVQPRSFGFSGTKDKRSVSTQRVTMFKQHASRLASLNERLIGIKVGNFCHVEGGLQLGQLLGNRFTITLRGVVADSEDTIRASADVLGKHGFINYFGLQRFGSGSVPTHLIGAALLRGEWKDAVDMILDPREGERDDIRKIRENYKKSNDIEGMLRRLPHHMVAERAVLQCLKKFPGNYVQALKAIPRTLRMMYVHSYQSYLWNHAASIRVHKYGADRVVVGDLVYCKEECSKDVISGHTDCENDISDEADNDSNLEELAEVDLPEEKNLTVKAVDEEDLVHQKYTINDVVLPLPGSRAMYPANDVAAVYHDLAKKDNISLTESVHNVKEFSITSMSGGYRCVFQKPGDFEWELLKYTDPSTPLADTDLDILVKFQSATMNEKEDAVNGSKVTSCDSVNLSEHYDGAMSGDSKREGASQTNNLEATQTALKLSFTLPASCYATMAIRELLKTSTSVAFHKTLNDQI*

Click here to download the sequence:
Link to NCBI Protein BLAST