Transcript Information: S_Transcript_81725.p1


Annotated TAIR IDAT5G59410.1
Annotated Gene NameRab5-interacting family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23959761-23960730 | Reverse length=130
E-Value6.8E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.870547936483
Replicate 222.235155100933
Replicate 320.603994218397
Condition 2: 8 Hour
Replicate 129.822225521616
Replicate 227.615250664663
Replicate 325.978689268571
Condition 3: 24 Hour
Replicate 117.236978379297
Replicate 219.299652045483
Replicate 317.143108306602


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81725.p1 GENE.S_Transcript_81725~~S_Transcript_81725.p1 ORF type:complete len:128 (+),score=17.70,Rab5ip|PF07019.8|2.8e-14 S_Transcript_81725:578-961(+)
ATGAAGGATAAGAAATCAGCGAAATTGAAACATCAGCATCAGCATCAGAATGGTCACACATCTCCCTTTAAACTAGGCAAATTGTTTGATCCTGATGCTACCTGGGATAAGGATCAACTAGGAGATGTGCTACATTGGATTCGACAAGTGGTGGGACTTGTGTGTGGATTGATCTGGGGCGCAATACCTCTTGTTGGAGGCGTGTGGCTCCTTTTTTTCTTGGCGCTTTCTACTGCCATCGTGTATGGATATTATGCGTTGATATTGAAGGTTGATGAAGAAGATTATGGTGGTCATGGAGCTCTCCTCCAGGAGGGGCTTTTTGCCTCCTTTACACTCTTTCTGCTTGCATGGATACTAGTATACAGCTTGGCACACTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81725.p1 GENE.S_Transcript_81725~~S_Transcript_81725.p1 ORF type:complete len:128 (+),score=17.70,Rab5ip|PF07019.8|2.8e-14 S_Transcript_81725:578-961(+)
MKDKKSAKLKHQHQHQNGHTSPFKLGKLFDPDATWDKDQLGDVLHWIRQVVGLVCGLIWGAIPLVGGVWLLFFLALSTAIVYGYYALILKVDEEDYGGHGALLQEGLFASFTLFLLAWILVYSLAHF*

Click here to download the sequence:
Link to NCBI Protein BLAST