Transcript Information: S_Transcript_81913.p1


Annotated TAIR IDAT1G71270.1
Annotated Gene NameVps52 / Sac2 family
Annotated Gene Symbol(s)POK, TTD8, ATVPS52
Annotation TypeOrtholog
Chromosome Positionchr1:26863736-26869817 | Forward length=707
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 116.342631744421
Replicate 217.090893319202
Replicate 316.182851521244
Condition 2: 8 Hour
Replicate 123.938501525007
Replicate 225.239226423128
Replicate 324.738392150007
Condition 3: 24 Hour
Replicate 116.768255637146
Replicate 215.577380351067
Replicate 318.365911207669


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81913.p1 GENE.S_Transcript_81913~~S_Transcript_81913.p1 ORF type:complete len:710 (+),score=146.06,Vps52|PF04129.8|4.6e-200,Sec3_C|PF09763.5|1.4e-10,Sec3_C|PF09763.5|1.1e+03 S_Transcript_81913:277-2406(+)
ATGGCTGAAGTTACTCCTACCAAATTGCAGCAGGATGGCTTAAATGGAGGGAAAATTGATTCCCAAGTGGATGTTCTTGACTTGGGGGCCTTTGTTGGAGATTTTTCCATCGAGGATGATGGAGGCAGTGATGATGTATCACTTGAAGGGCTGCAACAAGAACTGGAGGAATGTAAAAATGATGATGTGGTGGCTAATATCTTGTCAAAAGGTATCAAACTACGTGACTATACAAAGACTGTCGAAAACAATTTGCGTGAGGTTGAATTAGACTCTATTCAGGATTATATTCAGGAAAGTGATAATCTTGTGTCGCTTCATGATCAAATCCATGACTGTGATAACATCTTAACACAGATGGAATCCCTTCTGAGTGGGTTTCAGGCTGAGATTGGTTCCATAAGTTCAGACATAAAAGTTTTGCAAGAGAAGTCAATGGACATGGGCCTGAAGCTGAAGAACCGCAAGGCAGCAGAATCAAAGTTGGCCAAGTTTGTTGAAGATATTATTGTCCCACCTAGGATGGTTGATGTTATTGTGGATGGAGAGGTTAATGAGGAGTACATGAGAACTCTTGCAATACTCAGTAAGAAATTAAAGTATGTAGCTGCAGATCCTTTGGTTAAGACATCAATGGCTCTAAAAGATGTCCAGCCTGAGTTGGAAAGACTTCGTCAGAAAGCTGTTTCAAAGGTTTTTGATTTTATAGTTCAGAAGCTTTATGCATTGAGAAAGCCTAAGACAAACATACAAATTCTTCAACAAAGTGTTCTCTTGAAATACAAGTATGTTATTACCTTTCTCAAAAAGCATGGGAAGGAGATTTATACCGAGGTCCGGGCTGCGTATATTGATACAATGAATAAAGTCCTCAGTGCTCATTTTCGTGCATATATACAAGCCCTAGAGAAATTGCAGCTTGATGTAGCGACATCCAGTGATTTAATTGGTATTGAAGCTAGAAGCACAGGTCTTTTCTCTGCTATAAGAGAACCCTTGAAGAATCGATCCTCCGTTTTTGCGCTGGGGGACAGAATAAACATTTTGAAGGAAATTGATCAGCCTGCATTGATTCCCCATATAGCGGAAGCGAGCTCTCAGAAGTATCCTTATGAGGTCCTTTTCCGGAGCTTGCACAAGCTGCTAATGGATACTGCTAGTTCTGAGTACCTTTTTTGTGATGATTTTTTCGGAGAAGAGTCCTTATTTAATGAGATATTTGCAGGTCCATTTGCAGTAATTGATGAGCATTTCAACATGATTTTATCAAATTCTTTTGATGCCATTGGTCTAATGCTTATGATTCGCCTTACTCATCAGCACCAGCTTATCATGTCAAGAAGGCGGATTCCTTGCTTGGACCCATACTTGGACAAGGTGAACATTTCATTGTGGCCTCGTTTTAAGATGGTCTTTGACATGCACATCAGTAGTCTGCGTAGTGCAAATGTTAAAACGTTGTGGGAAGATGATGTTCATCCTCATTATGTGATGAGACGTTATGCTGAGTTTACTGCTTCCCTCATTCATCTCAATGTTGCATATGGAGATGGCCAGTTAGAGTTGAACTTGGATAGACTTAGAATGGCAGCTGATGATTTAATAATGAAGCTATCCACACAGTTTCATAAATCTAAACTGCAGACTGTGTTTCTTATAAACAACTATGACATGACAATTTCTGTCTTAAAGGAAGCTGGTCCAGAAGGTGGTAAGATTCAGTTGCATTTCGAGGAAGTGCTGAAGAGCCAAACAACAATATTTGTGGAAGAACTACTGCTGGAGCACTTCAGTGATCTGATCAAGTTTGTGAAAATTAGGGCATCTGAGGATACAAGTTCAAGCTCTGAGAAGTCCATAGCCATCACTGAAGTCGAACCGTTGGTGAAGGATTTTGCCAGCAGATGGAAAGACGCAATAGAGCTGATGCACAAAGATGTTATTACATCCTTCAGCAATTTCTTGTGCGGCATGGAGATATTAAGAACTTCACTGACCCAGTTGCTACTCTACTATACTAGGCTCTCTGACTGCGTGAAAAAGGTCCAGGGAGGATCTGCTCTCAACAAGGATCTTGTTTCTATTCAGCTAATTATACACGAGATCAGGAAATACTCGAGGACTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81913.p1 GENE.S_Transcript_81913~~S_Transcript_81913.p1 ORF type:complete len:710 (+),score=146.06,Vps52|PF04129.8|4.6e-200,Sec3_C|PF09763.5|1.4e-10,Sec3_C|PF09763.5|1.1e+03 S_Transcript_81913:277-2406(+)
MAEVTPTKLQQDGLNGGKIDSQVDVLDLGAFVGDFSIEDDGGSDDVSLEGLQQELEECKNDDVVANILSKGIKLRDYTKTVENNLREVELDSIQDYIQESDNLVSLHDQIHDCDNILTQMESLLSGFQAEIGSISSDIKVLQEKSMDMGLKLKNRKAAESKLAKFVEDIIVPPRMVDVIVDGEVNEEYMRTLAILSKKLKYVAADPLVKTSMALKDVQPELERLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVITFLKKHGKEIYTEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDVATSSDLIGIEARSTGLFSAIREPLKNRSSVFALGDRINILKEIDQPALIPHIAEASSQKYPYEVLFRSLHKLLMDTASSEYLFCDDFFGEESLFNEIFAGPFAVIDEHFNMILSNSFDAIGLMLMIRLTHQHQLIMSRRRIPCLDPYLDKVNISLWPRFKMVFDMHISSLRSANVKTLWEDDVHPHYVMRRYAEFTASLIHLNVAYGDGQLELNLDRLRMAADDLIMKLSTQFHKSKLQTVFLINNYDMTISVLKEAGPEGGKIQLHFEEVLKSQTTIFVEELLLEHFSDLIKFVKIRASEDTSSSSEKSIAITEVEPLVKDFASRWKDAIELMHKDVITSFSNFLCGMEILRTSLTQLLLYYTRLSDCVKKVQGGSALNKDLVSIQLIIHEIRKYSRTF*

Click here to download the sequence:
Link to NCBI Protein BLAST