Transcript Information: S_Transcript_81915.p1


Annotated TAIR IDAT1G71270.1
Annotated Gene NameVps52 / Sac2 family
Annotated Gene Symbol(s)POK, TTD8, ATVPS52
Annotation TypeOrtholog
Chromosome Positionchr1:26863736-26869817 | Forward length=707
E-Value2.9E-118
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.3435553661189
Replicate 24.5167915629558
Replicate 32.1056667182064
Condition 2: 8 Hour
Replicate 16.884574826791
Replicate 22.5542661832759
Replicate 33.860350353658
Condition 3: 24 Hour
Replicate 12.7521113059016
Replicate 21.9630073018884
Replicate 31.7873889735909


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_81915.p1 GENE.S_Transcript_81915~~S_Transcript_81915.p1 ORF type:complete len:254 (+),score=70.81,Vps52|PF04129.8|1.5e-50,Sec3_C|PF09763.5|1.2e-05 S_Transcript_81915:275-1036(+)
ATGGCTGAAGTTACTCCTACCAAATTGCAGCAGGATGGCTTAAATGGAGGGAAAATTGATTCCCAAGTGGATGTTCTTGACTTGGGGGCCTTTGTTGGAGATTTTTCCATCGAGGATGATGGAGGCAGTGATGATGTATCACTTGAAGGGCTGCAACAAGAACTGGAGGAATGTAAAAATGATGATGTGGTGGCTAATATCTTGTCAAAAGGTATCAAACTACGTGACTATACAAAGACTGTCGAAAACAATTTGCGTGAGGTTGAATTAGACTCTATTCAGGATTATATTCAGGAAAGTGATAATCTTGTGTCGCTTCATGATCAAATCCATGACTGTGATAACATCTTAACACAGATGGAATCCCTTCTGAGTGGGTTTCAGGCTGAGATTGGTTCCATAAGTTCAGACATAAAAGTTTTGCAAGAGAAGTCAATGGACATGGGCCTGAAGCTGAAGAACCGCAAGGCAGCAGAATCAAAGTTGGCCAAGTTTGTTGAAGATATTATTGTCCCACCTAGGATGGTTGATGTTATTGTGGATGGAGAGGTTAATGAGGAGTACATGAGAACTCTTGCAATACTCAGTAAGAAATTAAAGTATGTAGCTGCAGATCCTTTGGTTAAGACATCAATGGCTCTAAAAGATGTCCAGCCTGAGTTGGAAAGACTTCGTCAGAAAGCTGTTTCAAAGGTATGTTATTACCTTTCTCAAAGAGCATGGGAGGGAGATTTATACCGAGGTCCAGGCTGCATATATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_81915.p1 GENE.S_Transcript_81915~~S_Transcript_81915.p1 ORF type:complete len:254 (+),score=70.81,Vps52|PF04129.8|1.5e-50,Sec3_C|PF09763.5|1.2e-05 S_Transcript_81915:275-1036(+)
MAEVTPTKLQQDGLNGGKIDSQVDVLDLGAFVGDFSIEDDGGSDDVSLEGLQQELEECKNDDVVANILSKGIKLRDYTKTVENNLREVELDSIQDYIQESDNLVSLHDQIHDCDNILTQMESLLSGFQAEIGSISSDIKVLQEKSMDMGLKLKNRKAAESKLAKFVEDIIVPPRMVDVIVDGEVNEEYMRTLAILSKKLKYVAADPLVKTSMALKDVQPELERLRQKAVSKVCYYLSQRAWEGDLYRGPGCIY*

Click here to download the sequence:
Link to NCBI Protein BLAST