Transcript Information: S_Transcript_8197.p1


Annotated TAIR IDAT3G56010.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20788758-20789656 | Forward length=201
E-Value1E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 132.254466934804
Replicate 231.619942637729
Replicate 333.060941642952
Condition 2: 8 Hour
Replicate 126.239074722002
Replicate 224.639962326704
Replicate 326.62025207811
Condition 3: 24 Hour
Replicate 130.300967422437
Replicate 233.525730488514
Replicate 330.10373041901


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_8197.p1 GENE.S_Transcript_8197~~S_Transcript_8197.p1 ORF type:complete len:217 (+),score=32.76 S_Transcript_8197:395-1045(+)
ATGGCGGTTTCATTCTATTCCGTCAACCCTTTTAATCCTTCTTCGCAGGTATCAAGATCCTGCATTGGATCTTTTGTTACAAAAACTACCCATCTTTCATCCATCCCACCACTGCTGATCAACTCAAGTAGAACTGTGAAGCAACAAAGACGGCGCTCACATCTTTTGGTCGCAGAAAGTGACAGAATAATTACAGATGGTGGTGACAATTCCAGCAATTTAGAATCAGTTGCAGCGTCTCCTAACCCTGCTCAGTCAGAAGAAGTAAGTGTTTCCAAAGGCTCGAGCCCTCCAGCCTCTGAGGCACTGTCAACTCCAAAAAAAGTGCCACTAACGGCAAGAGAGAGATTAAGGGCGGCTAGGGTTCTTAGCCGTTACTCAGACCCCAAGCCTGCTAAACCAGAAATGGGGCGCAGTGTATTGGATGCATTGGAAGAAAGCGATAAGGGGAAGAAGGGCCTCCCAGAAGCTCCTACAAACCTGTTTGATGACAGCAAGCGGGGATTGCCAAAGCCAGGCCTGACGTTCAACTTCCCTGGAGGTTTTGATTTGTTTGTCATCGCCTTCTCTTTTGTTTTTATCAGCACAGTTATGTTTGCAACTACTTACCTTGTCTGGAAAGTTGGCGCTATCCATTTCAACGAGTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_8197.p1 GENE.S_Transcript_8197~~S_Transcript_8197.p1 ORF type:complete len:217 (+),score=32.76 S_Transcript_8197:395-1045(+)
MAVSFYSVNPFNPSSQVSRSCIGSFVTKTTHLSSIPPLLINSSRTVKQQRRRSHLLVAESDRIITDGGDNSSNLESVAASPNPAQSEEVSVSKGSSPPASEALSTPKKVPLTARERLRAARVLSRYSDPKPAKPEMGRSVLDALEESDKGKKGLPEAPTNLFDDSKRGLPKPGLTFNFPGGFDLFVIAFSFVFISTVMFATTYLVWKVGAIHFNEY*

Click here to download the sequence:
Link to NCBI Protein BLAST