Transcript Information: S_Transcript_82006.p1


Annotated TAIR IDAT3G47850.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; Has 57 Blast hits to 57 proteins in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17654256-17656000 | Reverse length=352
E-Value9.9E-68
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.026994799657
Replicate 210.625139446962
Replicate 311.964267884262
Condition 2: 8 Hour
Replicate 112.324021599703
Replicate 212.295010300586
Replicate 311.11081008305
Condition 3: 24 Hour
Replicate 19.9013636217991
Replicate 29.2452942407763
Replicate 312.003692521415


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_82006.p1 GENE.S_Transcript_82006~~S_Transcript_82006.p1 ORF type:complete len:353 (+),score=90.83 S_Transcript_82006:217-1275(+)
ATGGTGGCGATATCACTCTACAGAGGAAACATGCACAGAGTACCACCAGACGTACCAAGACGATGGCTAATGCCTACACCTCGAATCTCTATCAAGGACTTTCGCACTCTTCTCCATCGCCGCTCCAAGGCTCTCTCTCTCCTCCCTTCCTCTTCTTCAAACCCTAGCCCTAACTACCCCCCCTTACAACCACAGCCATCAATCAAGAACGAAGTTGATGATTTTGCGGAGCCTCCAAACCCTAATCCATCTCCCGAGCCTTCGAAATCTTTTGATGATAATGTTGTGGTTAAGGTCGAGGATGTTGTTGCTGCTGATTGTCAAGTCAAGCAGGTCGTGGTGACGTCGCCACTGGATCAGGTGACGTCGGCGTTGCTTGCCGATGACGACAAGGAGAAGGAGAACGAGAAAGAGAAAGTGGAGGAGAAGGTCGCTGTTGATGCGGACAATCGTGCTTTAGAGGGGGACAACAAATTGGATGTCACTGATGAAAAGGAGAAACGGAAAAGGGAGGTTGAGGAAAAGCTGCAAATCTTAAATGAAAAGAAACATAATTTAGTTCAGGCGCTTAAGCAGATTTTGAATGCGGAGGAGGAACTAAAGAGACGAAGCAATATGCAAGCTGGTCGACCTCCTCTTCCTCTTCAAGTGGATGCTTCAAATGACTCTGGGTCAATGACCGGACATGCTACACCTAGAGCAGGATCTGAGGCAAATGCTACTCCTGATATGGAGGGAGGAGAAGGTGATGATGCTTTAAACCATAACCCATACTCTCGCCAATTGCTCCGCATGAGCAGTACGTCGCCATCTGCAGAGTCTGCTCTCAGAAAGCCTCCATATTTCCAGCATAATGTGGTTTCTCACCCTTCTCGAGCAGCTATAGTCGCTGCTGGGAGTCCGTCTCGTTTTGCTCCCTCAGGAAACCAGGGCCACCCTTCAAACTTGCTAACAGTGTCTGTATCTGGGACCAACTATAATGCATCTTCACCCTCCCCAGCAGCATCTGGAGGCACCTCAGGTTTCAGAGATGCTCGACAACCTAGTCCATGGAATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_82006.p1 GENE.S_Transcript_82006~~S_Transcript_82006.p1 ORF type:complete len:353 (+),score=90.83 S_Transcript_82006:217-1275(+)
MVAISLYRGNMHRVPPDVPRRWLMPTPRISIKDFRTLLHRRSKALSLLPSSSSNPSPNYPPLQPQPSIKNEVDDFAEPPNPNPSPEPSKSFDDNVVVKVEDVVAADCQVKQVVVTSPLDQVTSALLADDDKEKENEKEKVEEKVAVDADNRALEGDNKLDVTDEKEKRKREVEEKLQILNEKKHNLVQALKQILNAEEELKRRSNMQAGRPPLPLQVDASNDSGSMTGHATPRAGSEANATPDMEGGEGDDALNHNPYSRQLLRMSSTSPSAESALRKPPYFQHNVVSHPSRAAIVAAGSPSRFAPSGNQGHPSNLLTVSVSGTNYNASSPSPAASGGTSGFRDARQPSPWN*

Click here to download the sequence:
Link to NCBI Protein BLAST